| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327765
Identifier: 116327765
GI number: 116327765
Start: 1194134
End: 1195633
Strand: Direct
Name: 116327765
Synonym: LBL_1023
Alternate gene names: NA
Gene position: 1194134-1195633 (Clockwise)
Preceding gene: 116327764
Following gene: 116327767
Centisome position: 33.04
GC content: 42.6
Gene sequence:
>1500_bases ATGAGTGCGAACAAGAAGCCTATAAATACACCAACGCCGGAATCTCAAGTTTCTCCAATTTCCATTGATTCTGCCGTCTC TATCTCGATTTCTCCGGATCAACTTTCAGCAACGATAACGGTTCGGCCTTACAATCTGAGAGGGGAAATCGTATCTAAGG ATAAACTTTGGAATATCATTCTCGATTGGGGAATCCACAGAGAAAGAATATTAACCGATGAGGTTCGAAGAGTTTTGGCG TTGCTTGAGGAAGCGGGCAAAAAAGGAGATTTCACTCCGATTAAAGTGGAAATCGCAAAAGGAGTGGCTCCGATTCCGGG AGAAAACGGCTGGGTCCGCTTTTATCATCCTATGGCGAAACGAGTTAAACTGCTCGAAGATGGCAGGGCCGATTTCAGAA ATATCGATCGTTATATCAATGTCAAAGTAGGTGAAAAGTTAGCTACGAAGTTTGAGGGAATTCTAGGAACTCCCGGTTTT GACGTATTTGGAAATATGATATCGGCGCCTGCGATTAAAAAACCAAAACTTGTGATCGGTAACAATATTGATGAAAGGAC GAATTTTGAGGAAGGAAAAGAACTTCGAGAGTATTTCGCTTCCTGCAACGGAGTGATTTTTGCTACGGAAGTATCAATTA CTGTATCTCCCGAACTTCAAATTGCCGGGAATGTAGGACTATCCACCGGAAACATTCGGTTTGATGGAAACGTAATCGTT CGAGGAGATATAGAGCCTGGTTCCGTTGTGGAATGCACCGGATCTCTTATCGTTTATGGAAACTTAGAAAGCAATGGGGT GACGGTCGGACGGGATTTGATCGTTCATGGGGGGATCAAAGGTTCCGGTACGGAAATCGTTCGAGTTACGGGAAGAATTC AGGCGAAGTTTATCGAAAATGCACATCTTGAAACGGAAGGGGATATCGTTCTAGAAGGGGCGATTCTGAATTCTACGATT GATACTTTGGGATCCATAGTTCTAAGCGGATCGAATGGAAACTTAGTTTCGAGTAAGATCAGAACCAACGAAGGAATTTC CGTTATTTCTTTGGGATCGAGCGCTGAATTAGACGTAACGGTGGAGCTTGGATTTCATTTTAAGAACGATCGCGCTTTTC AAGAGATCAGTAGAAAGATCCAGATGGGCGAGAAGGAGATGGAGAAGATTCTGCCTAAGATCCAACAGATCAAACATATG GTTCAACGTTCTCGAGGAAATCTTCCGGAAGACAAAAAGACCGCTTTTAAAACGATATTCGAAGATTATAATAAGAAAAT AAAGATTTTGAATCTTTTGAAATTCAAACAGGACAGTTTGAAAAGTGCGCGTTTTAATTCCGGTGCCGTAAGGCTTGCCG TTCAAAAGGGTGCGTTTCCCGGAACGGTGATACATTATAGAAGGCAGGTCGAGAAGATCACGAAATTCCAATCTTCTTTT ATGATGGTATTCGAACCGGGACAGGAAAAAGCGATTATGGTCGCGTTACAAATAAAGTAG
Upstream 100 bases:
>100_bases TTCAAAGGGGTTTCTATATACTACATTTGAATTTCTTATCTTTCGGTTGAAACTAGGAGATAAGAACGGAATGAGTTTAC GGCCAAAAGATTGAAATATC
Downstream 100 bases:
>100_bases TTCTACGAAAATTTCTCGAAAAAGGAAAGCATTTGAATCAGAGTTTCTCCCCAAGTTGCCTTTCTAATATATCTGTCCGT CGTTGTCGGATTTTATGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Two-Component Fusion Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MSANKKPINTPTPESQVSPISIDSAVSISISPDQLSATITVRPYNLRGEIVSKDKLWNIILDWGIHRERILTDEVRRVLA LLEEAGKKGDFTPIKVEIAKGVAPIPGENGWVRFYHPMAKRVKLLEDGRADFRNIDRYINVKVGEKLATKFEGILGTPGF DVFGNMISAPAIKKPKLVIGNNIDERTNFEEGKELREYFASCNGVIFATEVSITVSPELQIAGNVGLSTGNIRFDGNVIV RGDIEPGSVVECTGSLIVYGNLESNGVTVGRDLIVHGGIKGSGTEIVRVTGRIQAKFIENAHLETEGDIVLEGAILNSTI DTLGSIVLSGSNGNLVSSKIRTNEGISVISLGSSAELDVTVELGFHFKNDRAFQEISRKIQMGEKEMEKILPKIQQIKHM VQRSRGNLPEDKKTAFKTIFEDYNKKIKILNLLKFKQDSLKSARFNSGAVRLAVQKGAFPGTVIHYRRQVEKITKFQSSF MMVFEPGQEKAIMVALQIK
Sequences:
>Translated_499_residues MSANKKPINTPTPESQVSPISIDSAVSISISPDQLSATITVRPYNLRGEIVSKDKLWNIILDWGIHRERILTDEVRRVLA LLEEAGKKGDFTPIKVEIAKGVAPIPGENGWVRFYHPMAKRVKLLEDGRADFRNIDRYINVKVGEKLATKFEGILGTPGF DVFGNMISAPAIKKPKLVIGNNIDERTNFEEGKELREYFASCNGVIFATEVSITVSPELQIAGNVGLSTGNIRFDGNVIV RGDIEPGSVVECTGSLIVYGNLESNGVTVGRDLIVHGGIKGSGTEIVRVTGRIQAKFIENAHLETEGDIVLEGAILNSTI DTLGSIVLSGSNGNLVSSKIRTNEGISVISLGSSAELDVTVELGFHFKNDRAFQEISRKIQMGEKEMEKILPKIQQIKHM VQRSRGNLPEDKKTAFKTIFEDYNKKIKILNLLKFKQDSLKSARFNSGAVRLAVQKGAFPGTVIHYRRQVEKITKFQSSF MMVFEPGQEKAIMVALQIK >Mature_498_residues SANKKPINTPTPESQVSPISIDSAVSISISPDQLSATITVRPYNLRGEIVSKDKLWNIILDWGIHRERILTDEVRRVLAL LEEAGKKGDFTPIKVEIAKGVAPIPGENGWVRFYHPMAKRVKLLEDGRADFRNIDRYINVKVGEKLATKFEGILGTPGFD VFGNMISAPAIKKPKLVIGNNIDERTNFEEGKELREYFASCNGVIFATEVSITVSPELQIAGNVGLSTGNIRFDGNVIVR GDIEPGSVVECTGSLIVYGNLESNGVTVGRDLIVHGGIKGSGTEIVRVTGRIQAKFIENAHLETEGDIVLEGAILNSTID TLGSIVLSGSNGNLVSSKIRTNEGISVISLGSSAELDVTVELGFHFKNDRAFQEISRKIQMGEKEMEKILPKIQQIKHMV QRSRGNLPEDKKTAFKTIFEDYNKKIKILNLLKFKQDSLKSARFNSGAVRLAVQKGAFPGTVIHYRRQVEKITKFQSSFM MVFEPGQEKAIMVALQIK
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54991; Mature: 54860
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANKKPINTPTPESQVSPISIDSAVSISISPDQLSATITVRPYNLRGEIVSKDKLWNII CCCCCCCCCCCCCCCCCCCEEECCEEEEEECHHHEEEEEEEEEECCCCCEECCCCEEEEE LDWGIHRERILTDEVRRVLALLEEAGKKGDFTPIKVEIAKGVAPIPGENGWVRFYHPMAK EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECHHHH RVKLLEDGRADFRNIDRYINVKVGEKLATKFEGILGTPGFDVFGNMISAPAIKKPKLVIG HHHHHHCCCHHHHCCCCEEEEEECHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEC NNIDERTNFEEGKELREYFASCNGVIFATEVSITVSPELQIAGNVGLSTGNIRFDGNVIV CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEECCCCEECCCEEECCCEEE RGDIEPGSVVECTGSLIVYGNLESNGVTVGRDLIVHGGIKGSGTEIVRVTGRIQAKFIEN ECCCCCCCEEEECCCEEEEEECCCCCEEECCEEEEECCCCCCCCEEEEEECEEEEEEECC AHLETEGDIVLEGAILNSTIDTLGSIVLSGSNGNLVSSKIRTNEGISVISLGSSAELDVT CCCCCCCCEEEEEEEHHHHHHHHCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEE VELGFHFKNDRAFQEISRKIQMGEKEMEKILPKIQQIKHMVQRSRGNLPEDKKTAFKTIF EEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH EDYNKKIKILNLLKFKQDSLKSARFNSGAVRLAVQKGAFPGTVIHYRRQVEKITKFQSSF HHHCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCE MMVFEPGQEKAIMVALQIK EEEEECCCCCEEEEEEEEC >Mature Secondary Structure SANKKPINTPTPESQVSPISIDSAVSISISPDQLSATITVRPYNLRGEIVSKDKLWNII CCCCCCCCCCCCCCCCCCEEECCEEEEEECHHHEEEEEEEEEECCCCCEECCCCEEEEE LDWGIHRERILTDEVRRVLALLEEAGKKGDFTPIKVEIAKGVAPIPGENGWVRFYHPMAK EECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECHHHH RVKLLEDGRADFRNIDRYINVKVGEKLATKFEGILGTPGFDVFGNMISAPAIKKPKLVIG HHHHHHCCCHHHHCCCCEEEEEECHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEC NNIDERTNFEEGKELREYFASCNGVIFATEVSITVSPELQIAGNVGLSTGNIRFDGNVIV CCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEECCCCEECCCEEECCCEEE RGDIEPGSVVECTGSLIVYGNLESNGVTVGRDLIVHGGIKGSGTEIVRVTGRIQAKFIEN ECCCCCCCEEEECCCEEEEEECCCCCEEECCEEEEECCCCCCCCEEEEEECEEEEEEECC AHLETEGDIVLEGAILNSTIDTLGSIVLSGSNGNLVSSKIRTNEGISVISLGSSAELDVT CCCCCCCCEEEEEEEHHHHHHHHCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEE VELGFHFKNDRAFQEISRKIQMGEKEMEKILPKIQQIKHMVQRSRGNLPEDKKTAFKTIF EEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH EDYNKKIKILNLLKFKQDSLKSARFNSGAVRLAVQKGAFPGTVIHYRRQVEKITKFQSSF HHHCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCE MMVFEPGQEKAIMVALQIK EEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA