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The map label for this gene is 116327767

Identifier: 116327767

GI number: 116327767

Start: 1196926

End: 1197969

Strand: Direct

Name: 116327767

Synonym: LBL_1025

Alternate gene names: NA

Gene position: 1196926-1197969 (Clockwise)

Preceding gene: 116327765

Following gene: 116327768

Centisome position: 33.12

GC content: 41.09

Gene sequence:

>1044_bases
TTGCCCCGGCTTAGCCTGCTTGACTCTCTGACCACAATTCATATTCTATCCAATATGGCAAAAAGAAAATACCGAAACGG
AATATCTCTTTTCGGTTATTCCGTTTTTCATCCGATCAACCTGTTATTGATCGCGAACGTTTTTGTTTATATAATGCAGC
TTCTCGCCGGTGAAACCGGAATTTTAGAATATTACTTTGCGCTAACTCCTTCTAGGGTTTTTCAGGGATATTACTGGCAG
ATTTTTTCATACGGATTTTTACATGAGGCATACGGTATTCCTTTTGCACATTTGTTCTTTAATATGTACGTATTTGTGAT
GTTCGGAGGATTGATCTGTAAATACATTCCCTCTTGGAAGTTTACGGTTATCTACGTAGCAGCGGTCTTAATGGGGGGAA
TTTCCGTCATACTCGCACCTGTGTTCGTTCAAATATTAGGAATTCACTATCCTATGGATCTCTTGCATACTACGACACTC
GGCGCGAGCGGAGGAGTTACCGGAATTCTCGTTTTGTTTGGAATTTTATTTCCCGAAACGGAGGTGTTTCTCATTTTTTT
TAGAATGAGAGCGCGTTATGCGGCTTGGATTTTTGTGGGAGGCGGTTTTATCGCGGACATCGTTTCGGTGTATTATTTTC
ATTCTCCCTTTGTGGTAAGCAATTCTTGTCATTTAGGAGGAGCGATCGGCGCGATTCTTGTGGCTCCTTGGATTTTGAAG
GACAGTTTTTTAAACTCCGGGAAAATCCTTCTTAAAGAAACGGCTCAAAAAAATTCTCCTTCCAAACCGAAGGTTCTTTC
CTTAGAAGAGGATTGGGATTCTCAAACGAAAAAAAATCGGGAACTGCTGAATGAACTTGCACAAAGTATTACCTATTCGG
AGAAGAAATTTTTTTTGACTCCTTTGCAGCAAACGAACGTGAATTTATGTCCTCCGCCTACTTTCCAACCGAAAGACCCT
TTTTGTCTGCGTTGTGAATGGTTTCCGAATTGTGCTCTGAGGAAACTAAATACGGACCAAGAGTCGGATTTCGGGAGAAT
TTGA

Upstream 100 bases:

>100_bases
CCGACTCTAAAGGTTGAGGTCCGATTTTTCGATTTAAAGAATGTGATTGAAAAATCATTCTCCTTACTCCCGGAGAATGT
AGGAAACCCGGGGCGGTTTT

Downstream 100 bases:

>100_bases
TTCTCTGAAATTTTCCGTTGCAGGAAGAGAAATTCGGTATTCTTTTGGAAGGAGAATTTTCTTCCGTGATTTTTACAGTT
TACTACAAAATCGAAAAGGA

Product: rhomboid family protein

Products: NA

Alternate protein names: Cytoplasmic Membrane Protein

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MPRLSLLDSLTTIHILSNMAKRKYRNGISLFGYSVFHPINLLLIANVFVYIMQLLAGETGILEYYFALTPSRVFQGYYWQ
IFSYGFLHEAYGIPFAHLFFNMYVFVMFGGLICKYIPSWKFTVIYVAAVLMGGISVILAPVFVQILGIHYPMDLLHTTTL
GASGGVTGILVLFGILFPETEVFLIFFRMRARYAAWIFVGGGFIADIVSVYYFHSPFVVSNSCHLGGAIGAILVAPWILK
DSFLNSGKILLKETAQKNSPSKPKVLSLEEDWDSQTKKNRELLNELAQSITYSEKKFFLTPLQQTNVNLCPPPTFQPKDP
FCLRCEWFPNCALRKLNTDQESDFGRI

Sequences:

>Translated_347_residues
MPRLSLLDSLTTIHILSNMAKRKYRNGISLFGYSVFHPINLLLIANVFVYIMQLLAGETGILEYYFALTPSRVFQGYYWQ
IFSYGFLHEAYGIPFAHLFFNMYVFVMFGGLICKYIPSWKFTVIYVAAVLMGGISVILAPVFVQILGIHYPMDLLHTTTL
GASGGVTGILVLFGILFPETEVFLIFFRMRARYAAWIFVGGGFIADIVSVYYFHSPFVVSNSCHLGGAIGAILVAPWILK
DSFLNSGKILLKETAQKNSPSKPKVLSLEEDWDSQTKKNRELLNELAQSITYSEKKFFLTPLQQTNVNLCPPPTFQPKDP
FCLRCEWFPNCALRKLNTDQESDFGRI
>Mature_346_residues
PRLSLLDSLTTIHILSNMAKRKYRNGISLFGYSVFHPINLLLIANVFVYIMQLLAGETGILEYYFALTPSRVFQGYYWQI
FSYGFLHEAYGIPFAHLFFNMYVFVMFGGLICKYIPSWKFTVIYVAAVLMGGISVILAPVFVQILGIHYPMDLLHTTTLG
ASGGVTGILVLFGILFPETEVFLIFFRMRARYAAWIFVGGGFIADIVSVYYFHSPFVVSNSCHLGGAIGAILVAPWILKD
SFLNSGKILLKETAQKNSPSKPKVLSLEEDWDSQTKKNRELLNELAQSITYSEKKFFLTPLQQTNVNLCPPPTFQPKDPF
CLRCEWFPNCALRKLNTDQESDFGRI

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39310; Mature: 39178

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRLSLLDSLTTIHILSNMAKRKYRNGISLFGYSVFHPINLLLIANVFVYIMQLLAGETG
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ILEYYFALTPSRVFQGYYWQIFSYGFLHEAYGIPFAHLFFNMYVFVMFGGLICKYIPSWK
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
FTVIYVAAVLMGGISVILAPVFVQILGIHYPMDLLHTTTLGASGGVTGILVLFGILFPET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCH
EVFLIFFRMRARYAAWIFVGGGFIADIVSVYYFHSPFVVSNSCHLGGAIGAILVAPWILK
HHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHH
DSFLNSGKILLKETAQKNSPSKPKVLSLEEDWDSQTKKNRELLNELAQSITYSEKKFFLT
HHHCCCCCEEEEHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEC
PLQQTNVNLCPPPTFQPKDPFCLRCEWFPNCALRKLNTDQESDFGRI
CHHHCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA