| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327764
Identifier: 116327764
GI number: 116327764
Start: 1192512
End: 1193558
Strand: Direct
Name: 116327764
Synonym: LBL_1022
Alternate gene names: NA
Gene position: 1192512-1193558 (Clockwise)
Preceding gene: 116327763
Following gene: 116327765
Centisome position: 32.99
GC content: 39.45
Gene sequence:
>1047_bases ATGCCGATGAACTTTTTCAGCGCCATCCGCGGATTCCCGTTTTTGATCGATTATTCCGGATTAAAAATTCCCAAACAAAC AAGTATAACGGAAATTAGTTTGGATTTAGACGACTTGGTCTCATTGAGAACGAAGGTTTTAGAAAATCCGGGAAACACTA AAAAACCGGTGATTTATCTCCAACACGGAATGAGTTTTAAAGGAATCGACGACGAGAGAATTCTCGCACTTGGAAATAAT CTTGCAAATCGGGGATTTCGTGTTTATCTTCCGGAACTTCCGGAAGTGAAAAACCTATTGATTCGTTCCGAAACGATCTC CAATATACGCGCCGCGTTTCTTCGGATTCACACTTTGGAAAAAAGTTCCGTATCTTATTTATCCGCAAGTTTTTCGGCCG GTATGGGTTTTGTCGCATTAGCAAATCAGGAATGTCAGAAGGTATTGACTTCCGCGTTTTTGATCGGCGCGTTTTCGGAT TTCAGAAAAACTTTACCGTTCGTATTAAAAAATTACGGGATTGAAAGTTATGCGGTAAATGTGATGATGTACAATTACAT TCATCTAATTCGCTCTCAGCCGGAGATTCTAAAAAAATATTTTTTAGAATCCGCTTTGGATAATGGACTTTCCAGGACGG GAAATATGGCACTGGGGCCGAAGATTTTTTCTAGTTTAGAGGAAGGAGATAAGAATTTCATAAAAAAATTTTTGGAAAGT TCAGATTTTCGAGAGAACATCGCGCTTGAAATCAAAGCGATTGTCCCGGAAAGTTTTGCGATAGAGACTTCCCCCGCGTT TTTTGCGGATTGTTTTTTCAAACCTTGTTTTTTACTCCATGGAAATGACGATTCCGTCATTTCTCCTCAAGAGTCCAAGG ATCTTAGGGATTTGATTTTAGAGAATAAAGATTCTTCCGTTTCCTTTTTGGAAACCGGTCTGTTGACTCATGGGGATCAT CGTCCTTTTTATTCGCGTTTGAGTGAAATTTTTCCTATGGCAAAATTTTGGGGAGAATATCTTTTTTCCGCCAGCCGTTC TTTTTGA
Upstream 100 bases:
>100_bases AAAAAATTGAGGATCCCTGAATACGATTCGTATCGATTCCAATTAAAAAAACATGGGCTAAAAAAATTGTGGAGATTTTT ACCGAAGACTAAAATCTGCA
Downstream 100 bases:
>100_bases ACGCGCTTTATTACTCGGATGTATGAAGATGGTACCAAAAATGAACGGGTGATTTTTGTAAAGGTATAGAAATCCTCACA AAATTGCGCCGAATCCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPMNFFSAIRGFPFLIDYSGLKIPKQTSITEISLDLDDLVSLRTKVLENPGNTKKPVIYLQHGMSFKGIDDERILALGNN LANRGFRVYLPELPEVKNLLIRSETISNIRAAFLRIHTLEKSSVSYLSASFSAGMGFVALANQECQKVLTSAFLIGAFSD FRKTLPFVLKNYGIESYAVNVMMYNYIHLIRSQPEILKKYFLESALDNGLSRTGNMALGPKIFSSLEEGDKNFIKKFLES SDFRENIALEIKAIVPESFAIETSPAFFADCFFKPCFLLHGNDDSVISPQESKDLRDLILENKDSSVSFLETGLLTHGDH RPFYSRLSEIFPMAKFWGEYLFSASRSF
Sequences:
>Translated_348_residues MPMNFFSAIRGFPFLIDYSGLKIPKQTSITEISLDLDDLVSLRTKVLENPGNTKKPVIYLQHGMSFKGIDDERILALGNN LANRGFRVYLPELPEVKNLLIRSETISNIRAAFLRIHTLEKSSVSYLSASFSAGMGFVALANQECQKVLTSAFLIGAFSD FRKTLPFVLKNYGIESYAVNVMMYNYIHLIRSQPEILKKYFLESALDNGLSRTGNMALGPKIFSSLEEGDKNFIKKFLES SDFRENIALEIKAIVPESFAIETSPAFFADCFFKPCFLLHGNDDSVISPQESKDLRDLILENKDSSVSFLETGLLTHGDH RPFYSRLSEIFPMAKFWGEYLFSASRSF >Mature_347_residues PMNFFSAIRGFPFLIDYSGLKIPKQTSITEISLDLDDLVSLRTKVLENPGNTKKPVIYLQHGMSFKGIDDERILALGNNL ANRGFRVYLPELPEVKNLLIRSETISNIRAAFLRIHTLEKSSVSYLSASFSAGMGFVALANQECQKVLTSAFLIGAFSDF RKTLPFVLKNYGIESYAVNVMMYNYIHLIRSQPEILKKYFLESALDNGLSRTGNMALGPKIFSSLEEGDKNFIKKFLESS DFRENIALEIKAIVPESFAIETSPAFFADCFFKPCFLLHGNDDSVISPQESKDLRDLILENKDSSVSFLETGLLTHGDHR PFYSRLSEIFPMAKFWGEYLFSASRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39313; Mature: 39181
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMNFFSAIRGFPFLIDYSGLKIPKQTSITEISLDLDDLVSLRTKVLENPGNTKKPVIYL CCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEE QHGMSFKGIDDERILALGNNLANRGFRVYLPELPEVKNLLIRSETISNIRAAFLRIHTLE ECCCCCCCCCCCHHEEECCHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC KSSVSYLSASFSAGMGFVALANQECQKVLTSAFLIGAFSDFRKTLPFVLKNYGIESYAVN HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VMMYNYIHLIRSQPEILKKYFLESALDNGLSRTGNMALGPKIFSSLEEGDKNFIKKFLES HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCC SDFRENIALEIKAIVPESFAIETSPAFFADCFFKPCFLLHGNDDSVISPQESKDLRDLIL CCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHH ENKDSSVSFLETGLLTHGDHRPFYSRLSEIFPMAKFWGEYLFSASRSF CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PMNFFSAIRGFPFLIDYSGLKIPKQTSITEISLDLDDLVSLRTKVLENPGNTKKPVIYL CCCHHHHHCCCCEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCEEEE QHGMSFKGIDDERILALGNNLANRGFRVYLPELPEVKNLLIRSETISNIRAAFLRIHTLE ECCCCCCCCCCCHHEEECCHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC KSSVSYLSASFSAGMGFVALANQECQKVLTSAFLIGAFSDFRKTLPFVLKNYGIESYAVN HHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH VMMYNYIHLIRSQPEILKKYFLESALDNGLSRTGNMALGPKIFSSLEEGDKNFIKKFLES HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCC SDFRENIALEIKAIVPESFAIETSPAFFADCFFKPCFLLHGNDDSVISPQESKDLRDLIL CCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHH ENKDSSVSFLETGLLTHGDHRPFYSRLSEIFPMAKFWGEYLFSASRSF CCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA