| Definition | Leptospira borgpetersenii serovar Hardjo-bovis L550 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008508 |
| Length | 3,614,446 |
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The map label for this gene is 116327747
Identifier: 116327747
GI number: 116327747
Start: 1172110
End: 1172922
Strand: Direct
Name: 116327747
Synonym: LBL_1003
Alternate gene names: NA
Gene position: 1172110-1172922 (Clockwise)
Preceding gene: 116327746
Following gene: 116327748
Centisome position: 32.43
GC content: 43.42
Gene sequence:
>813_bases GTGTCCATCACGCGGGATTTTTGGAATCCCGAAGTCTATGAAACTCTTTTTCAAATGCCGCCCGGTAAGGCGGCATTCGA TTTTGATAATACTCTTGTAAGGAACGATTTCGGAGAAGCCGTGATGGAGCTTTTTCTTTCGCAAGGAGTTCCCGCTTACA AAAAAGACGTTTCCCCTTTTTTAAGGGAGAATACAGACAAGGTTCTTTCCGCTCGTTTTCAAAATCCGGCTTTATTTCGT TCTCTCGTTCTTTCCGAATACGAATCCATTCAATCCAAATTCGGGCTCGAGGCATCTTATCGATGGAGTTCTTGGATTTT TTCCGGACATTCTCCGGAGGAATTGAAAGAAATTTCTAGAAAGGTATGGAACGAGCACGCGTTTGATTCAGGCTTACATT CCGTCAAGATCTACGAACCGATGAAAGAACTCGTCGGTCATCTTCTTGAAAATCAATGGGAGGTATGGATTGTGACCTCT TCTCCTCAGGAAATTATTCAATCCGTTTCTCCACTTTTCGGAATTCCGGTCGAAAGGGTTTTAGGGATGCAACTATTTCT TGAAAACGGACTCCATTCTTCGGAGATATTGGAACCGTTTACCTACGGTAAAGGGAAGGTCGAAAGACTGAAAGTTGCAA CGGGTGGTTTTGTGGATCTTGCTTTCGGAGATTCTGTCAACGACTTTGTTTTGCTTGATTCTGCCACACAGATGGGAATT TTTTTGGATAGAGGAAAGGGAGTTGTTCCTCCTTCTCCTACGAAGGTTCAGTCTGTTTCAAGTTGGAACGTTTTGCAGAA AGTTGTCGTGTAG
Upstream 100 bases:
>100_bases TTATCAAAATGTGGTATTAAATCCGGAACACTATTTTCCGGTCTTTCAATCTTCTTCCGAGGCTCGTGTGGCGATCGCTC GGGAGACGATAGAAGAATAA
Downstream 100 bases:
>100_bases GTTTTTTCGTTTTTTGAATTGAATAGAGTTGTTGAAAAATTAATTCTCTGTCCGTTTCTGTTTCATTGAAATGGACGTTT GAAGCGGTTTTGTTAATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSITRDFWNPEVYETLFQMPPGKAAFDFDNTLVRNDFGEAVMELFLSQGVPAYKKDVSPFLRENTDKVLSARFQNPALFR SLVLSEYESIQSKFGLEASYRWSSWIFSGHSPEELKEISRKVWNEHAFDSGLHSVKIYEPMKELVGHLLENQWEVWIVTS SPQEIIQSVSPLFGIPVERVLGMQLFLENGLHSSEILEPFTYGKGKVERLKVATGGFVDLAFGDSVNDFVLLDSATQMGI FLDRGKGVVPPSPTKVQSVSSWNVLQKVVV
Sequences:
>Translated_270_residues MSITRDFWNPEVYETLFQMPPGKAAFDFDNTLVRNDFGEAVMELFLSQGVPAYKKDVSPFLRENTDKVLSARFQNPALFR SLVLSEYESIQSKFGLEASYRWSSWIFSGHSPEELKEISRKVWNEHAFDSGLHSVKIYEPMKELVGHLLENQWEVWIVTS SPQEIIQSVSPLFGIPVERVLGMQLFLENGLHSSEILEPFTYGKGKVERLKVATGGFVDLAFGDSVNDFVLLDSATQMGI FLDRGKGVVPPSPTKVQSVSSWNVLQKVVV >Mature_269_residues SITRDFWNPEVYETLFQMPPGKAAFDFDNTLVRNDFGEAVMELFLSQGVPAYKKDVSPFLRENTDKVLSARFQNPALFRS LVLSEYESIQSKFGLEASYRWSSWIFSGHSPEELKEISRKVWNEHAFDSGLHSVKIYEPMKELVGHLLENQWEVWIVTSS PQEIIQSVSPLFGIPVERVLGMQLFLENGLHSSEILEPFTYGKGKVERLKVATGGFVDLAFGDSVNDFVLLDSATQMGIF LDRGKGVVPPSPTKVQSVSSWNVLQKVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30516; Mature: 30385
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITRDFWNPEVYETLFQMPPGKAAFDFDNTLVRNDFGEAVMELFLSQGVPAYKKDVSPF CCCCCCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHH LRENTDKVLSARFQNPALFRSLVLSEYESIQSKFGLEASYRWSSWIFSGHSPEELKEISR HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHH KVWNEHAFDSGLHSVKIYEPMKELVGHLLENQWEVWIVTSSPQEIIQSVSPLFGIPVERV HHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHH LGMQLFLENGLHSSEILEPFTYGKGKVERLKVATGGFVDLAFGDSVNDFVLLDSATQMGI HHHHHHHHCCCCHHHHHCCHHCCCCCEEEEEEECCCEEEEEECCCCCCEEEEECCCHHCE FLDRGKGVVPPSPTKVQSVSSWNVLQKVVV EEECCCCCCCCCCCHHHCCHHHHHHHHHCC >Mature Secondary Structure SITRDFWNPEVYETLFQMPPGKAAFDFDNTLVRNDFGEAVMELFLSQGVPAYKKDVSPF CCCCCCCCHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCHH LRENTDKVLSARFQNPALFRSLVLSEYESIQSKFGLEASYRWSSWIFSGHSPEELKEISR HHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHH KVWNEHAFDSGLHSVKIYEPMKELVGHLLENQWEVWIVTSSPQEIIQSVSPLFGIPVERV HHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCHHHH LGMQLFLENGLHSSEILEPFTYGKGKVERLKVATGGFVDLAFGDSVNDFVLLDSATQMGI HHHHHHHHCCCCHHHHHCCHHCCCCCEEEEEEECCCEEEEEECCCCCCEEEEECCCHHCE FLDRGKGVVPPSPTKVQSVSSWNVLQKVVV EEECCCCCCCCCCCHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA