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The map label for this gene is 116326912

Identifier: 116326912

GI number: 116326912

Start: 82927

End: 84429

Strand: Reverse

Name: 116326912

Synonym: LBL_0072

Alternate gene names: NA

Gene position: 84429-82927 (Counterclockwise)

Preceding gene: 116326913

Following gene: 116326910

Centisome position: 2.34

GC content: 35.6

Gene sequence:

>1503_bases
ATGGCTTTTCGAATTTTGTTTTTTTCGATTGTTTTGTGTTCTTTCTTAACTTCGCTGTATGCGGATTTGAAAGAAGGTAA
AAAGGCTTATGCGAAAAAGGACTTTTCCAAAGCCATGAATGAGTTCCAAAAGTTTAACAATGCAAATCCGGCTTCCGGTG
AAGCTTGGATGTACATGGGTTATATCTACGAATATAGAAGGGACTATCCTAAGTCCATTCAAAGCTTTAAAAAAGCAGTC
AGTCTTAGTTTATCTAAAAAGGATTTAGTCAATTGTTATCAAAAGATCATTCTCTATTTCAACTATCAGAGGGATTATCA
TGAGGTGATTTCTTACTCGAATCGGCTTTTGAGAATTGATCCGGATTTAACTCATATTCAGAAAATAAAAGCTACTGCGG
AAGAAAGACTTTCTTCCGGTCACGTGGTGCATCATCGTTCTAAAAAACATGCGGAGGAATCGGAGATTGATGGACCGAAT
ACGGAAGAAGATTATCTTAAAATTCTTAAGAAAGAGCCAAATGACGTTTCCGCTCGTTGGAATCTTTCTCTCGTTTATTC
AAATCATAAAAAGTTTCAACAAGCGGAAAATCTTTTGGAAGGACTTGTGAGGGACTTTCCCGGAAAGGATGATTATCTTT
ACAAATACGGTGTTACTCTCATTCGTCTTGAAAAATACTCGGAAGCTCTTGAGGTTTTAGATAAACTCGAAGATAAGATC
GGAATGAATAATCCTAAGATGTTATATTATACCAATTTAAACCAAGCAGTTGCATATCATAAAATGAAGCATTATGAAGA
GGCGATAAAGTATTATAAAAAATCTTATGCTGTAAATGGTACAATCCAACCTTTAATCGGACTAACAAAGCTTAAATACG
AAATTAAAGATTGTGAAAATTCAATTAAAACCGCCGAGAAGGCGCTTGAGTTCGGTGAAAGGACACATGAGATTCGAATG
TATTTGGCTCTTTGCAAAATTCAAAATAAGGAAGAAAATGAAGGATATGTCATATTAAAGGAAATCGCCTCCAAACTGGA
AAAAGAAAATCCTGAGTTCAAAAATTTGCCAGATGTTTACAACGACGGAATTTTAAAATTAGCCCGTTACTATACGAATC
ATGGAGAATACACAAAGGCCCTTCGTTATTTTCACTCCGTTCAAGTTTCCGAGGAAGAGGAAAGAGAATATCGTTTTTAT
CTGGGTAAGGCTTATTATTATACGGGAAAGGTAGATCAAGCGATTTTACTTTTAACAAAAGTAAACGGTTCTTCAGGTGC
ATATTATTTATTAGCAAAATGTTATGCGCATAAGGATGACCTTGAAAAAACCATGGAATATATACGTAAAGCCGCAAATA
TGAAACCGGAAATTTGGTCGGCCGCGGCGGAAGAAAAAGAATTTGACCGATTTAAGGAAAAATCTCCCTTTAGATCTTTT
TTAGAAACTAAGGGATCTGATCAAGGAACGAATCAGAGTTCTCGAGCTTTGGATAAGACTTAA

Upstream 100 bases:

>100_bases
AAGGTTTTTTTGGGGAATATATTTTAGGAAATTTATTATAAACCAAAAAGAGACCACAAATTCACTTTTAAAAAAGGTTT
CCTTTTCGATATTTGGTTTT

Downstream 100 bases:

>100_bases
ATTTATTTTAGGGCCCTCTTAAAAGTCATCCTTAAAATTATATAAGAATCTATCCAGCCCCAGTTTTTTCTTACGGAAAA
AACTGGGGCTGGATAAAAGC

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Signal Peptide

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MAFRILFFSIVLCSFLTSLYADLKEGKKAYAKKDFSKAMNEFQKFNNANPASGEAWMYMGYIYEYRRDYPKSIQSFKKAV
SLSLSKKDLVNCYQKIILYFNYQRDYHEVISYSNRLLRIDPDLTHIQKIKATAEERLSSGHVVHHRSKKHAEESEIDGPN
TEEDYLKILKKEPNDVSARWNLSLVYSNHKKFQQAENLLEGLVRDFPGKDDYLYKYGVTLIRLEKYSEALEVLDKLEDKI
GMNNPKMLYYTNLNQAVAYHKMKHYEEAIKYYKKSYAVNGTIQPLIGLTKLKYEIKDCENSIKTAEKALEFGERTHEIRM
YLALCKIQNKEENEGYVILKEIASKLEKENPEFKNLPDVYNDGILKLARYYTNHGEYTKALRYFHSVQVSEEEEREYRFY
LGKAYYYTGKVDQAILLLTKVNGSSGAYYLLAKCYAHKDDLEKTMEYIRKAANMKPEIWSAAAEEKEFDRFKEKSPFRSF
LETKGSDQGTNQSSRALDKT

Sequences:

>Translated_500_residues
MAFRILFFSIVLCSFLTSLYADLKEGKKAYAKKDFSKAMNEFQKFNNANPASGEAWMYMGYIYEYRRDYPKSIQSFKKAV
SLSLSKKDLVNCYQKIILYFNYQRDYHEVISYSNRLLRIDPDLTHIQKIKATAEERLSSGHVVHHRSKKHAEESEIDGPN
TEEDYLKILKKEPNDVSARWNLSLVYSNHKKFQQAENLLEGLVRDFPGKDDYLYKYGVTLIRLEKYSEALEVLDKLEDKI
GMNNPKMLYYTNLNQAVAYHKMKHYEEAIKYYKKSYAVNGTIQPLIGLTKLKYEIKDCENSIKTAEKALEFGERTHEIRM
YLALCKIQNKEENEGYVILKEIASKLEKENPEFKNLPDVYNDGILKLARYYTNHGEYTKALRYFHSVQVSEEEEREYRFY
LGKAYYYTGKVDQAILLLTKVNGSSGAYYLLAKCYAHKDDLEKTMEYIRKAANMKPEIWSAAAEEKEFDRFKEKSPFRSF
LETKGSDQGTNQSSRALDKT
>Mature_499_residues
AFRILFFSIVLCSFLTSLYADLKEGKKAYAKKDFSKAMNEFQKFNNANPASGEAWMYMGYIYEYRRDYPKSIQSFKKAVS
LSLSKKDLVNCYQKIILYFNYQRDYHEVISYSNRLLRIDPDLTHIQKIKATAEERLSSGHVVHHRSKKHAEESEIDGPNT
EEDYLKILKKEPNDVSARWNLSLVYSNHKKFQQAENLLEGLVRDFPGKDDYLYKYGVTLIRLEKYSEALEVLDKLEDKIG
MNNPKMLYYTNLNQAVAYHKMKHYEEAIKYYKKSYAVNGTIQPLIGLTKLKYEIKDCENSIKTAEKALEFGERTHEIRMY
LALCKIQNKEENEGYVILKEIASKLEKENPEFKNLPDVYNDGILKLARYYTNHGEYTKALRYFHSVQVSEEEEREYRFYL
GKAYYYTGKVDQAILLLTKVNGSSGAYYLLAKCYAHKDDLEKTMEYIRKAANMKPEIWSAAAEEKEFDRFKEKSPFRSFL
ETKGSDQGTNQSSRALDKT

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58613; Mature: 58482

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFRILFFSIVLCSFLTSLYADLKEGKKAYAKKDFSKAMNEFQKFNNANPASGEAWMYMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
YIYEYRRDYPKSIQSFKKAVSLSLSKKDLVNCYQKIILYFNYQRDYHEVISYSNRLLRID
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEC
PDLTHIQKIKATAEERLSSGHVVHHRSKKHAEESEIDGPNTEEDYLKILKKEPNDVSARW
CCHHHHHHHHHHHHHHHCCCCEEECCCHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCEE
NLSLVYSNHKKFQQAENLLEGLVRDFPGKDDYLYKYGVTLIRLEKYSEALEVLDKLEDKI
EEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEEHHHHHHHHHHHHHHHHHH
GMNNPKMLYYTNLNQAVAYHKMKHYEEAIKYYKKSYAVNGTIQPLIGLTKLKYEIKDCEN
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SIKTAEKALEFGERTHEIRMYLALCKIQNKEENEGYVILKEIASKLEKENPEFKNLPDVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHH
NDGILKLARYYTNHGEYTKALRYFHSVQVSEEEEREYRFYLGKAYYYTGKVDQAILLLTK
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEECCCCCEEEEEEE
VNGSSGAYYLLAKCYAHKDDLEKTMEYIRKAANMKPEIWSAAAEEKEFDRFKEKSPFRSF
ECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LETKGSDQGTNQSSRALDKT
HHCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
AFRILFFSIVLCSFLTSLYADLKEGKKAYAKKDFSKAMNEFQKFNNANPASGEAWMYMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
YIYEYRRDYPKSIQSFKKAVSLSLSKKDLVNCYQKIILYFNYQRDYHEVISYSNRLLRID
HHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEC
PDLTHIQKIKATAEERLSSGHVVHHRSKKHAEESEIDGPNTEEDYLKILKKEPNDVSARW
CCHHHHHHHHHHHHHHHCCCCEEECCCHHCCCHHCCCCCCCHHHHHHHHHCCCCCCCCEE
NLSLVYSNHKKFQQAENLLEGLVRDFPGKDDYLYKYGVTLIRLEKYSEALEVLDKLEDKI
EEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEEHHHHHHHHHHHHHHHHHH
GMNNPKMLYYTNLNQAVAYHKMKHYEEAIKYYKKSYAVNGTIQPLIGLTKLKYEIKDCEN
CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
SIKTAEKALEFGERTHEIRMYLALCKIQNKEENEGYVILKEIASKLEKENPEFKNLPDVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHH
NDGILKLARYYTNHGEYTKALRYFHSVQVSEEEEREYRFYLGKAYYYTGKVDQAILLLTK
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEEEEECCCCCEEEEEEE
VNGSSGAYYLLAKCYAHKDDLEKTMEYIRKAANMKPEIWSAAAEEKEFDRFKEKSPFRSF
ECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHH
LETKGSDQGTNQSSRALDKT
HHCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA