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The map label for this gene is ybaB [C]

Identifier: 116326906

GI number: 116326906

Start: 74117

End: 74464

Strand: Direct

Name: ybaB [C]

Synonym: LBL_0065

Alternate gene names: 116326906

Gene position: 74117-74464 (Clockwise)

Preceding gene: 116326905

Following gene: 116326907

Centisome position: 2.05

GC content: 44.54

Gene sequence:

>348_bases
ATGCTTGATAAAATAAAAAACCTGTCGGAACTTCTCTCCAACATGGGAGCCCTCCGAGAAAAAATGGAAGACGTAAAAAA
ACGCATCGCCTCCATTCGAGTAGTAGGAGACGCGGGAGCGGGAATGGTAACCGTTACGGCTACAGGGGAAGGGCAAATCA
TAAACGTGTTCATCAACAAACAACTCTTCGACTCAGATGATAATAAAATGCTCGAAGATCTTGTTATGGCCGCGACAAAT
GACGCCCTCAAAAAAGCAAAAGAAGCGACCGCTTACGAATTTCAAGCTGCATCCGGTGGTTTGGACTTTTCCGAAATTTC
CAAAATGTTCGGCGGAAATTTTGGCTAA

Upstream 100 bases:

>100_bases
CCAAATTTGCAAAAATTCGATACGAGTACCGAAATAAAGAAAAAATTTCTCGGAACCGAAGTAGATCAAAGTAAAATCCC
TAAATTGGATTCTTAACGTT

Downstream 100 bases:

>100_bases
TCATCTTCTTGAAGAAATGGTGGATGCTCTCTCTTCGCTTCCGGGGATCGGAAGAAAGAGTGCTTTTAGAATTAGTTTTC
ACCTTTTAAGACTTGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLDKIKNLSELLSNMGALREKMEDVKKRIASIRVVGDAGAGMVTVTATGEGQIINVFINKQLFDSDDNKMLEDLVMAATN
DALKKAKEATAYEFQAASGGLDFSEISKMFGGNFG

Sequences:

>Translated_115_residues
MLDKIKNLSELLSNMGALREKMEDVKKRIASIRVVGDAGAGMVTVTATGEGQIINVFINKQLFDSDDNKMLEDLVMAATN
DALKKAKEATAYEFQAASGGLDFSEISKMFGGNFG
>Mature_115_residues
MLDKIKNLSELLSNMGALREKMEDVKKRIASIRVVGDAGAGMVTVTATGEGQIINVFINKQLFDSDDNKMLEDLVMAATN
DALKKAKEATAYEFQAASGGLDFSEISKMFGGNFG

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=102, Percent_Identity=36.2745098039216, Blast_Score=64, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y065_LEPBL (Q056Q2)

Other databases:

- EMBL:   CP000348
- RefSeq:   YP_796626.1
- ProteinModelPortal:   Q056Q2
- SMR:   Q056Q2
- STRING:   Q056Q2
- GeneID:   4408637
- GenomeReviews:   CP000348_GR
- KEGG:   lbl:LBL_0065
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MEEMIQA
- ProtClustDB:   PRK14624
- BioCyc:   LBOR355276:LBL_0065-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12397; Mature: 12397

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKIKNLSELLSNMGALREKMEDVKKRIASIRVVGDAGAGMVTVTATGEGQIINVFINK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCEEEEEEECC
QLFDSDDNKMLEDLVMAATNDALKKAKEATAYEFQAASGGLDFSEISKMFGGNFG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure
MLDKIKNLSELLSNMGALREKMEDVKKRIASIRVVGDAGAGMVTVTATGEGQIINVFINK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCEEEEEEECC
QLFDSDDNKMLEDLVMAATNDALKKAKEATAYEFQAASGGLDFSEISKMFGGNFG
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA