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The map label for this gene is recR [H]

Identifier: 116326907

GI number: 116326907

Start: 74457

End: 75050

Strand: Direct

Name: recR [H]

Synonym: LBL_0066

Alternate gene names: 116326907

Gene position: 74457-75050 (Clockwise)

Preceding gene: 116326906

Following gene: 116326911

Centisome position: 2.06

GC content: 41.25

Gene sequence:

>594_bases
TTGGCTAATCATCTTCTTGAAGAAATGGTGGATGCTCTCTCTTCGCTTCCGGGGATCGGAAGAAAGAGTGCTTTTAGAAT
TAGTTTTCACCTTTTAAGACTTGAACAGGGTCATTTTAATCATTTCATTCACCAACTCACGAACACGAAAAACAAAATCA
AATTTTGCAAACGATGCGGTTCTTATGCGGAAACGGAAATTTGCAACATCTGTACCTCGGAAAAAAGAGATACCCACACA
TTCTGTGTCGTGGAACAACCGGAAGACATTTTTTTTATCGAAAACACAAGAGAATTTCACGGCAAATATCACGTGTTAAA
CGGAGTAATCTCCCCTTTGGAGGGAATTGGACCGAAAGATCTTAGAATCAAAGAACTTTTGGAAAGAATCGAACCAGAAC
AAATAAAAGAAGTTTTGGTCGCCACGAACCCAACTCTTGAAGGAGATGCAACCGCAGATTATTTAGCGAGTCAGTTAAAA
CCCCTTTCTGTCGACGTTACTCGAATTGCTTACGGGATTACGGTCGGAGGCTCGATTGAACTTGCAGACCAATACACTTT
GGGAAGAGCCATTCGTTCCCGTCTTCAGCTTTAA

Upstream 100 bases:

>100_bases
GACGCCCTCAAAAAAGCAAAAGAAGCGACCGCTTACGAATTTCAAGCTGCATCCGGTGGTTTGGACTTTTCCGAAATTTC
CAAAATGTTCGGCGGAAATT

Downstream 100 bases:

>100_bases
TTTTAGAATCTATGTTCTGCAGTTACAAAAAATTCCCTAAGAATTTTTCCGTAAGTCGTATCTAAATAAGCCTTCAATCC
ATCCCCCGCTATAAAATAAC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAETEICNICTSEKRDTHT
FCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLK
PLSVDVTRIAYGITVGGSIELADQYTLGRAIRSRLQL

Sequences:

>Translated_197_residues
MANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAETEICNICTSEKRDTHT
FCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLK
PLSVDVTRIAYGITVGGSIELADQYTLGRAIRSRLQL
>Mature_196_residues
ANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCGSYAETEICNICTSEKRDTHTF
CVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKDLRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKP
LSVDVTRIAYGITVGGSIELADQYTLGRAIRSRLQL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=191, Percent_Identity=42.9319371727749, Blast_Score=170, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22253; Mature: 22122

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCG
CHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCC
SYAETEICNICTSEKRDTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKD
CHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCCC
LRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIE
CHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEHHHHHEEEEECCEEE
LADQYTLGRAIRSRLQL
EHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANHLLEEMVDALSSLPGIGRKSAFRISFHLLRLEQGHFNHFIHQLTNTKNKIKFCKRCG
HHHHHHHHHHHHHHCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCC
SYAETEICNICTSEKRDTHTFCVVEQPEDIFFIENTREFHGKYHVLNGVISPLEGIGPKD
CHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCCC
LRIKELLERIEPEQIKEVLVATNPTLEGDATADYLASQLKPLSVDVTRIAYGITVGGSIE
CHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEHHHHHEEEEECCEEE
LADQYTLGRAIRSRLQL
EHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA