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The map label for this gene is ybhP [H]

Identifier: 116249399

GI number: 116249399

Start: 802947

End: 803675

Strand: Reverse

Name: ybhP [H]

Synonym: pRL120737

Alternate gene names: 116249399

Gene position: 803675-802947 (Counterclockwise)

Preceding gene: 116249401

Following gene: 116249394

Centisome position: 92.37

GC content: 61.59

Gene sequence:

>729_bases
ATGCCGGATAAATCAATCAAACTCCTGACCTATAACGTGCACAGTTGTATCGGCGGCGACCGGAAGCTCGATCCCGGCCG
CATCGCTTCTGTCATCGCCGAGGCTGAGGCTGATATCGTCGCTCTTCAGGAGGTCGACGTCCTCAGGCGCAGGACCGGCG
GCGTCGACCAGGCCCATGCGATCGCCTCGCTTTTGAAGATGCAGGCTCATTTCCATCCGGCGCTGTCGATCGCCGAAGAG
CAGTATGGCGATGCGATCATCACTTCGCTGCCGACAGGCGCGGTCAAGGCCGGACCATTGCCATCCATCGGCGAACAGCG
CGGCGCCATTTCCGTCGAAATACTGGTCGGCAACAGAAAACTGCTGGTCGTCAACACCCATCTCGGCCTTCGTGGCCGCG
AGCGCATCCGGCAGATGACGACATTGCTGAACCCCGGCTGGCTGCGCGGCACGGCGGATGAACCTCTTCCAACCATCCTC
TGCGGCGATTTCAACGCCATTCCGTCATCGGCGACTTACCGACTTGCCGCGCGGTCATTGAAAGACGTCCAGCTCGCAGG
CGGCGCCGCGCCGAGAGCGACCTTTCCCTCGCGCTACCCGCTGATGCGCCTCGACCACATCTTCGTCACGGACGATCTCA
TCGTCAAAAAGGCGGCGGTCCTGGAAAACCGCCTGACAAGGATTGCCTCGGACCACCTGCCTCTGCTCGCGGAAATCGGC
TTCGCCTGA

Upstream 100 bases:

>100_bases
AGCTCATCGATTGTCCTCAGGAGTGCGAGCGCCATAGTCCGATCATCGGGAACGATCAAACGAGTTTTGTGTTCCCCCGG
GGAACGAGTTCAGCGGGCCC

Downstream 100 bases:

>100_bases
ACAGTCATCGAAGCTGACGACTTTCACCGGGCGAGCTTCCGGTTCATCGCCGCCGCCACCAACGGTAGCGCCGTCGTCGC
CACGGCTCCCAGAGGCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MPDKSIKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLLKMQAHFHPALSIAEE
QYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVNTHLGLRGRERIRQMTTLLNPGWLRGTADEPLPTIL
CGDFNAIPSSATYRLAARSLKDVQLAGGAAPRATFPSRYPLMRLDHIFVTDDLIVKKAAVLENRLTRIASDHLPLLAEIG
FA

Sequences:

>Translated_242_residues
MPDKSIKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLLKMQAHFHPALSIAEE
QYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVNTHLGLRGRERIRQMTTLLNPGWLRGTADEPLPTIL
CGDFNAIPSSATYRLAARSLKDVQLAGGAAPRATFPSRYPLMRLDHIFVTDDLIVKKAAVLENRLTRIASDHLPLLAEIG
FA
>Mature_241_residues
PDKSIKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLLKMQAHFHPALSIAEEQ
YGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVNTHLGLRGRERIRQMTTLLNPGWLRGTADEPLPTILC
GDFNAIPSSATYRLAARSLKDVQLAGGAAPRATFPSRYPLMRLDHIFVTDDLIVKKAAVLENRLTRIASDHLPLLAEIGF
A

Specific function: Unknown

COG id: COG3568

COG function: function code R; Metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787008, Length=255, Percent_Identity=28.2352941176471, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005135 [H]

Pfam domain/function: PF03372 Exo_endo_phos [H]

EC number: NA

Molecular weight: Translated: 26115; Mature: 25983

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDKSIKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHA
CCCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCHHHH
IASLLKMQAHFHPALSIAEEQYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRK
HHHHHHHHHHHCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
LLVVNTHLGLRGRERIRQMTTLLNPGWLRGTADEPLPTILCGDFNAIPSSATYRLAARSL
EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
KDVQLAGGAAPRATFPSRYPLMRLDHIFVTDDLIVKKAAVLENRLTRIASDHLPLLAEIG
HHHHCCCCCCCCCCCCCCCCCEEECEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
FA
CC
>Mature Secondary Structure 
PDKSIKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHA
CCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCCHHHH
IASLLKMQAHFHPALSIAEEQYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRK
HHHHHHHHHHHCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCE
LLVVNTHLGLRGRERIRQMTTLLNPGWLRGTADEPLPTILCGDFNAIPSSATYRLAARSL
EEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
KDVQLAGGAAPRATFPSRYPLMRLDHIFVTDDLIVKKAAVLENRLTRIASDHLPLLAEIG
HHHHCCCCCCCCCCCCCCCCCEEECEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
FA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]