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The map label for this gene is 116249401

Identifier: 116249401

GI number: 116249401

Start: 804678

End: 806204

Strand: Reverse

Name: 116249401

Synonym: pRL120739

Alternate gene names: NA

Gene position: 806204-804678 (Counterclockwise)

Preceding gene: 116249403

Following gene: 116249399

Centisome position: 92.66

GC content: 61.89

Gene sequence:

>1527_bases
ATGACGACATTCGAAACCATCTTCAATAACCCGAGCTTGCCCCAAACAAAATCACAACGGCCGGGCGACGGCCAAAAACA
GGAGGACAGCGCCTTGTCCCTGGAAGGGAGCGCTGCCAAGGCGGCCTTCCTGATCAACGGCAACAGCTATTTCGCAGAGC
TGGCGCGCGCGTTGCGGCAGGCGCGGCGCACCATCTGGATCGTCGGGTGGGATTTCAATCCGAACATCCGGTTGGAACCC
GATAAGTCAGACGAAACGCTGGCCGACCTGTTGCATGCCCTGGCAGCGGCAAATCCGAAGCTCGAAATACGCATCCTCAT
CTGGGCGCTCGGTCCCGTTTATTCTGGCAAGTCCCTGCAGCCGCTGCGGAAGAAAGACTTTCCCAGGAATGTGCGGATCG
ATCTGCGCTTCGAACTTCAGCCGACATTGCGCGGCTGCCACCATCAAAAACTCGTCTCTATCGACGATACCGTCTCCTTC
ATCGGCGGCATAGACCTGACGTCGCGCCGGTGGGACACCTGGCTCCACCGCGCCAAGGATAAGCTACGGCGCGACCCCAA
GGGCGTTTCCTATGATCCGCTGCATGACGTTCAGGCAATGGTCACCGGCGACGCCGCCAGGTTGATCGGCGATATCGTCA
GGCAGCGCTGGGAAAACGCCACCGGCGAAAGCCACCTGCCGCTGGCCGAAAATGTCCCCTTCGCCTGGCCGGACGATCTC
GCCGTTTCGATGAGGGAGATCGCGGTCAGCTTGGCGCCGACGGAGCCGTCGACCGCTTTTCGCCCCGGCGTCAGCGACGG
CATCGCCATGACATTGGACGTCGTCGCCCGGGCGAGGCGGCAGCTTTACATCGAGGCGCAATATCTCGCCTCCTTCCGCG
TCGCCGACGCCATTGCCGCGCGGCTACAGGAGGAAGACGGCCCCGAAGTTGTCATCATCTGCACGCGCAGTTCTCATGGG
CTGATCGAAAAGATTGTCATGGGCGGCAATCGCGACCGAGTCATCCGCCGCCTCAAACGCGCCGATCGCGCCGATCGCCT
GCGCGTCTACTATGCCGTCGTGCCCGGGCCAATCGTGCCCGGGCCAGTCACGGCGAAAGAGAGCGGCGAGGTGGAGGTGC
TCGTCCATTCCAAACTGATCATCGCCGATGACGAGCTGGTCCGCATCGGCTCCTCCAACCTCAACAATCGCTCGGAAGGG
CTGGATGGCGAATGCGACATGCTGTTCGAGGCCGGCAACAACGAGCATCGCCGCGCGATCGCGGACCTGCGCAATTGCCT
GCTTTCGGAATATCTCGGAACCACCCCGGAAAGTTTTGCCGCAGCCATTATGCAAAGCGGCTCGTTGATCCAGGCGGTCG
ACGCGCTCAATGACGGGCCTCGGGGTTTACGGGAATTCACCGTCGAGCTGTCGGGCAGCATTTCACCGATTTCAGGCACG
GCGATCTTCGACCCGGTTCGACCCTTCGCAGTTTTAAACCGACTGGGCCTCGGCACGCTCGTCCGCCGCCTCATTCGCCC
CGCGTGA

Upstream 100 bases:

>100_bases
TTTGCATCGCAGGCTGCCCGTAGCGCACCACTGGCCGACGCTATGGGGGAACCCAGGCAAATTCCGGGCGTTTGTGCTCC
AGTTAGAGGCCGAGGCAATC

Downstream 100 bases:

>100_bases
CGCCCGTCGGAAAACGACCTCGCTGATGACGAGAAGGGTCGTGCCGAGCGCCAGCGGAATGAAGAAATAGGCGCAGCGGA
ACGCAATCAACGCGCCGATC

Product: putative phospholipase

Products: NA

Alternate protein names: Phospholipase D; SNARE Associated Golgi Protein; Phospholipase D Family Protein; SNARE Associated Golgi Protein-Like Protein; SNARE Associated Golgi Protein-Related Protein; Phospholipase D Domain Protein; Transmembrane Phospholipase Protein; SNARE Associated Golgi Protein-Associated Protein; Phospholipase/Transphosphatidylase; Phospholipase D Alpha; Phospholipase Protein; Phospholipase D Active Site Motif Domain Protein; Phospholipase; Phospholipase D Protein; Phospholipase/Phosphatidylserine Synthase; Phospholipase D Superfamily Protein

Number of amino acids: Translated: 508; Mature: 507

Protein sequence:

>508_residues
MTTFETIFNNPSLPQTKSQRPGDGQKQEDSALSLEGSAAKAAFLINGNSYFAELARALRQARRTIWIVGWDFNPNIRLEP
DKSDETLADLLHALAAANPKLEIRILIWALGPVYSGKSLQPLRKKDFPRNVRIDLRFELQPTLRGCHHQKLVSIDDTVSF
IGGIDLTSRRWDTWLHRAKDKLRRDPKGVSYDPLHDVQAMVTGDAARLIGDIVRQRWENATGESHLPLAENVPFAWPDDL
AVSMREIAVSLAPTEPSTAFRPGVSDGIAMTLDVVARARRQLYIEAQYLASFRVADAIAARLQEEDGPEVVIICTRSSHG
LIEKIVMGGNRDRVIRRLKRADRADRLRVYYAVVPGPIVPGPVTAKESGEVEVLVHSKLIIADDELVRIGSSNLNNRSEG
LDGECDMLFEAGNNEHRRAIADLRNCLLSEYLGTTPESFAAAIMQSGSLIQAVDALNDGPRGLREFTVELSGSISPISGT
AIFDPVRPFAVLNRLGLGTLVRRLIRPA

Sequences:

>Translated_508_residues
MTTFETIFNNPSLPQTKSQRPGDGQKQEDSALSLEGSAAKAAFLINGNSYFAELARALRQARRTIWIVGWDFNPNIRLEP
DKSDETLADLLHALAAANPKLEIRILIWALGPVYSGKSLQPLRKKDFPRNVRIDLRFELQPTLRGCHHQKLVSIDDTVSF
IGGIDLTSRRWDTWLHRAKDKLRRDPKGVSYDPLHDVQAMVTGDAARLIGDIVRQRWENATGESHLPLAENVPFAWPDDL
AVSMREIAVSLAPTEPSTAFRPGVSDGIAMTLDVVARARRQLYIEAQYLASFRVADAIAARLQEEDGPEVVIICTRSSHG
LIEKIVMGGNRDRVIRRLKRADRADRLRVYYAVVPGPIVPGPVTAKESGEVEVLVHSKLIIADDELVRIGSSNLNNRSEG
LDGECDMLFEAGNNEHRRAIADLRNCLLSEYLGTTPESFAAAIMQSGSLIQAVDALNDGPRGLREFTVELSGSISPISGT
AIFDPVRPFAVLNRLGLGTLVRRLIRPA
>Mature_507_residues
TTFETIFNNPSLPQTKSQRPGDGQKQEDSALSLEGSAAKAAFLINGNSYFAELARALRQARRTIWIVGWDFNPNIRLEPD
KSDETLADLLHALAAANPKLEIRILIWALGPVYSGKSLQPLRKKDFPRNVRIDLRFELQPTLRGCHHQKLVSIDDTVSFI
GGIDLTSRRWDTWLHRAKDKLRRDPKGVSYDPLHDVQAMVTGDAARLIGDIVRQRWENATGESHLPLAENVPFAWPDDLA
VSMREIAVSLAPTEPSTAFRPGVSDGIAMTLDVVARARRQLYIEAQYLASFRVADAIAARLQEEDGPEVVIICTRSSHGL
IEKIVMGGNRDRVIRRLKRADRADRLRVYYAVVPGPIVPGPVTAKESGEVEVLVHSKLIIADDELVRIGSSNLNNRSEGL
DGECDMLFEAGNNEHRRAIADLRNCLLSEYLGTTPESFAAAIMQSGSLIQAVDALNDGPRGLREFTVELSGSISPISGTA
IFDPVRPFAVLNRLGLGTLVRRLIRPA

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56152; Mature: 56021

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFETIFNNPSLPQTKSQRPGDGQKQEDSALSLEGSAAKAAFLINGNSYFAELARALRQ
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHH
ARRTIWIVGWDFNPNIRLEPDKSDETLADLLHALAAANPKLEIRILIWALGPVYSGKSLQ
HCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCC
PLRKKDFPRNVRIDLRFELQPTLRGCHHQKLVSIDDTVSFIGGIDLTSRRWDTWLHRAKD
CHHHCCCCCCEEEEEEEEECHHHCCCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHHH
KLRRDPKGVSYDPLHDVQAMVTGDAARLIGDIVRQRWENATGESHLPLAENVPFAWPDDL
HHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
AVSMREIAVSLAPTEPSTAFRPGVSDGIAMTLDVVARARRQLYIEAQYLASFRVADAIAA
HHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH
RLQEEDGPEVVIICTRSSHGLIEKIVMGGNRDRVIRRLKRADRADRLRVYYAVVPGPIVP
HHHCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCC
GPVTAKESGEVEVLVHSKLIIADDELVRIGSSNLNNRSEGLDGECDMLFEAGNNEHRRAI
CCCCCCCCCCEEEEEECEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHH
ADLRNCLLSEYLGTTPESFAAAIMQSGSLIQAVDALNDGPRGLREFTVELSGSISPISGT
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCC
AIFDPVRPFAVLNRLGLGTLVRRLIRPA
EEECCCHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
TTFETIFNNPSLPQTKSQRPGDGQKQEDSALSLEGSAAKAAFLINGNSYFAELARALRQ
CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCHHHHHHHHHHHH
ARRTIWIVGWDFNPNIRLEPDKSDETLADLLHALAAANPKLEIRILIWALGPVYSGKSLQ
HCCEEEEEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCC
PLRKKDFPRNVRIDLRFELQPTLRGCHHQKLVSIDDTVSFIGGIDLTSRRWDTWLHRAKD
CHHHCCCCCCEEEEEEEEECHHHCCCCCCCEECHHHHHHHHCCCCCCCHHHHHHHHHHHH
KLRRDPKGVSYDPLHDVQAMVTGDAARLIGDIVRQRWENATGESHLPLAENVPFAWPDDL
HHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
AVSMREIAVSLAPTEPSTAFRPGVSDGIAMTLDVVARARRQLYIEAQYLASFRVADAIAA
HHHHHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHH
RLQEEDGPEVVIICTRSSHGLIEKIVMGGNRDRVIRRLKRADRADRLRVYYAVVPGPIVP
HHHCCCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCC
GPVTAKESGEVEVLVHSKLIIADDELVRIGSSNLNNRSEGLDGECDMLFEAGNNEHRRAI
CCCCCCCCCCEEEEEECEEEEECCCEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHH
ADLRNCLLSEYLGTTPESFAAAIMQSGSLIQAVDALNDGPRGLREFTVELSGSISPISGT
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCC
AIFDPVRPFAVLNRLGLGTLVRRLIRPA
EEECCCHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA