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The map label for this gene is yesO [H]

Identifier: 116249220

GI number: 116249220

Start: 604724

End: 606016

Strand: Direct

Name: yesO [H]

Synonym: pRL120556

Alternate gene names: 116249220

Gene position: 604724-606016 (Clockwise)

Preceding gene: 116249219

Following gene: 116249221

Centisome position: 69.51

GC content: 61.33

Gene sequence:

>1293_bases
ATGGGTAATCGTTTACTTTCCGCACTCTTAGCGTCCGCTGCCCTGGTCGCGACCGCGGGTTTCGCCGAGGCGAAGACCGT
CATCCACGTCATGCACCAGGGCGATCCCGGCTGGGTGAAGGCCTATGGCGACGTTGCCACCCGCTTTGAGGCCGCCAATC
CCGATGTCGACATCGAGATGATCTACGCGCCGCACGATGCCTATAACGAAAAGTTCAGCGCCGCCGTCATGGCCAAGCAG
CTGCCCGATATCATGGAACTCGATGCTCCGTTCCTCGCCAATTATGTCTGGTCCGGCTATCTGCAGGCCGTCAAGCCGCT
CATTGACAAGGACCTGCTCGATGACATGACGGATTCGAATATCGCCCAGGGCACCTATCCGATCGACAAGGACCTCTATG
CGATCGGGCTCACCGACTCCTCGGTCGTGCTCTACGGCAACAAGAAATATCTTGAAGCCATTGGCGCCCGCATTCCGAAA
TCGGTCGATGATGCCTGGACCCGCGAAGAATTCGAAGGCTATCTCGAAAAGCTTTCCAAGCTCGAAGGCGTGAAGTGGCC
GATCGACACCTTCCGAGGTTACGGCATCAAGACCGAGTGGATCACCTATGCCTACGGCCCCCTGCTCGAAAGCGCCGGCT
GCGACCTGATCGACCGCAAGACTTGGAAGGCCAGCGGCACGCTCGATGGCGAGGCCTGCGTCAAGGCGCTGACGATGATG
CAGGACTGGGTGAAGAAGGGCTGGGTCGTGCCGACTTCGTCGGGCACCAACCAGTTCTACGCCGAGGGACAGCCGGCCGC
GCTCGCCATGGGCGGCCACTGGTTCTACGCGGAGGCATCGGCAGCGATGAAGGACAATATCGTCGTCATGCCGCTGCCGA
AGATCGGCGACAAGGGCGTGAGCCCGAACGGAACCTGGATCTGGGGCATTTCCGCGACCTCGGAAAACCCTGAGATCGCC
GGCAAGTTCCTGAGCTTCCTGCTGAAGGACAAGGAGTACCGGGAGTACGCCAAGACCCAGTCCGCCTATCCGGGCTTGAA
GAGCTTCGCCGCCGGTTCCCCGCTCTATGCGGAAGGCGGTCCGCTCGCCGTCGCCTTTGAGCAGGCTTCCAAGACCGCGA
TCGCCCGTCCGCCGCACCCGGCCTATCCGACGATCACCTCGGCCTTCATGCAGGCCGTCGACAAGATCTTCAACGGTGGT
GACGCGCAGGAAGCGCTGACGGCCGCTGCCAAGAAGATCGACGAGGATATCGAGGACAACGCCGGCTACCCGCCCTTCGA
CGAGCAGCAGTAA

Upstream 100 bases:

>100_bases
CGCCGCATCTGCATAAACTGCCGTTCCATCTGGTCGAACGGGCATCCGTCTGAACATCGAATAGTGCCAAACAGGAGGAG
AATACGAAATGAGGATTTTA

Downstream 100 bases:

>100_bases
GGGGTTTTGACGGGGGCCGGCTCGTCCTGCCGGCCCTGGACCATCTCGGGAGGATGACCGATGAGGAGGAAACAATGACT
TTGCAACAGACCTCCACGCC

Product: putative substrate-binding component of ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MGNRLLSALLASAALVATAGFAEAKTVIHVMHQGDPGWVKAYGDVATRFEAANPDVDIEMIYAPHDAYNEKFSAAVMAKQ
LPDIMELDAPFLANYVWSGYLQAVKPLIDKDLLDDMTDSNIAQGTYPIDKDLYAIGLTDSSVVLYGNKKYLEAIGARIPK
SVDDAWTREEFEGYLEKLSKLEGVKWPIDTFRGYGIKTEWITYAYGPLLESAGCDLIDRKTWKASGTLDGEACVKALTMM
QDWVKKGWVVPTSSGTNQFYAEGQPAALAMGGHWFYAEASAAMKDNIVVMPLPKIGDKGVSPNGTWIWGISATSENPEIA
GKFLSFLLKDKEYREYAKTQSAYPGLKSFAAGSPLYAEGGPLAVAFEQASKTAIARPPHPAYPTITSAFMQAVDKIFNGG
DAQEALTAAAKKIDEDIEDNAGYPPFDEQQ

Sequences:

>Translated_430_residues
MGNRLLSALLASAALVATAGFAEAKTVIHVMHQGDPGWVKAYGDVATRFEAANPDVDIEMIYAPHDAYNEKFSAAVMAKQ
LPDIMELDAPFLANYVWSGYLQAVKPLIDKDLLDDMTDSNIAQGTYPIDKDLYAIGLTDSSVVLYGNKKYLEAIGARIPK
SVDDAWTREEFEGYLEKLSKLEGVKWPIDTFRGYGIKTEWITYAYGPLLESAGCDLIDRKTWKASGTLDGEACVKALTMM
QDWVKKGWVVPTSSGTNQFYAEGQPAALAMGGHWFYAEASAAMKDNIVVMPLPKIGDKGVSPNGTWIWGISATSENPEIA
GKFLSFLLKDKEYREYAKTQSAYPGLKSFAAGSPLYAEGGPLAVAFEQASKTAIARPPHPAYPTITSAFMQAVDKIFNGG
DAQEALTAAAKKIDEDIEDNAGYPPFDEQQ
>Mature_429_residues
GNRLLSALLASAALVATAGFAEAKTVIHVMHQGDPGWVKAYGDVATRFEAANPDVDIEMIYAPHDAYNEKFSAAVMAKQL
PDIMELDAPFLANYVWSGYLQAVKPLIDKDLLDDMTDSNIAQGTYPIDKDLYAIGLTDSSVVLYGNKKYLEAIGARIPKS
VDDAWTREEFEGYLEKLSKLEGVKWPIDTFRGYGIKTEWITYAYGPLLESAGCDLIDRKTWKASGTLDGEACVKALTMMQ
DWVKKGWVVPTSSGTNQFYAEGQPAALAMGGHWFYAEASAAMKDNIVVMPLPKIGDKGVSPNGTWIWGISATSENPEIAG
KFLSFLLKDKEYREYAKTQSAYPGLKSFAAGSPLYAEGGPLAVAFEQASKTAIARPPHPAYPTITSAFMQAVDKIFNGGD
AQEALTAAAKKIDEDIEDNAGYPPFDEQQ

Specific function: May play role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 46826; Mature: 46695

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRLLSALLASAALVATAGFAEAKTVIHVMHQGDPGWVKAYGDVATRFEAANPDVDIEM
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCCEEEHHHHHHHHCCCCCCCEEEE
IYAPHDAYNEKFSAAVMAKQLPDIMELDAPFLANYVWSGYLQAVKPLIDKDLLDDMTDSN
EECCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IAQGTYPIDKDLYAIGLTDSSVVLYGNKKYLEAIGARIPKSVDDAWTREEFEGYLEKLSK
CCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LEGVKWPIDTFRGYGIKTEWITYAYGPLLESAGCDLIDRKTWKASGTLDGEACVKALTMM
HCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
QDWVKKGWVVPTSSGTNQFYAEGQPAALAMGGHWFYAEASAAMKDNIVVMPLPKIGDKGV
HHHHHCCEEEECCCCCCCEEECCCCEEEEECCEEEEEECCHHHHCCEEEEECCCCCCCCC
SPNGTWIWGISATSENPEIAGKFLSFLLKDKEYREYAKTQSAYPGLKSFAAGSPLYAEGG
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCCCEECCC
PLAVAFEQASKTAIARPPHPAYPTITSAFMQAVDKIFNGGDAQEALTAAAKKIDEDIEDN
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
AGYPPFDEQQ
CCCCCCCCCC
>Mature Secondary Structure 
GNRLLSALLASAALVATAGFAEAKTVIHVMHQGDPGWVKAYGDVATRFEAANPDVDIEM
CHHHHHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCCEEEHHHHHHHHCCCCCCCEEEE
IYAPHDAYNEKFSAAVMAKQLPDIMELDAPFLANYVWSGYLQAVKPLIDKDLLDDMTDSN
EECCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
IAQGTYPIDKDLYAIGLTDSSVVLYGNKKYLEAIGARIPKSVDDAWTREEFEGYLEKLSK
CCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LEGVKWPIDTFRGYGIKTEWITYAYGPLLESAGCDLIDRKTWKASGTLDGEACVKALTMM
HCCCCCCHHHHCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
QDWVKKGWVVPTSSGTNQFYAEGQPAALAMGGHWFYAEASAAMKDNIVVMPLPKIGDKGV
HHHHHCCEEEECCCCCCCEEECCCCEEEEECCEEEEEECCHHHHCCEEEEECCCCCCCCC
SPNGTWIWGISATSENPEIAGKFLSFLLKDKEYREYAKTQSAYPGLKSFAAGSPLYAEGG
CCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCCCCEECCC
PLAVAFEQASKTAIARPPHPAYPTITSAFMQAVDKIFNGGDAQEALTAAAKKIDEDIEDN
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
AGYPPFDEQQ
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]