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The map label for this gene is yurN [H]

Identifier: 116249221

GI number: 116249221

Start: 606091

End: 607023

Strand: Direct

Name: yurN [H]

Synonym: pRL120557

Alternate gene names: 116249221

Gene position: 606091-607023 (Clockwise)

Preceding gene: 116249220

Following gene: 116249222

Centisome position: 69.66

GC content: 61.41

Gene sequence:

>933_bases
ATGACTTTGCAACAGACCTCCACGCCCGCTTTGCGACGTCCGGCCAAACGCCGCGACAACAAGCGGCTCTGGCAGGAAAT
GGCGATGATCGCGCCTGCCTTTCTGCTTATGGCGATATTCCTGATCACGCCGTTCCTCTTGTCCTTCTGGACGGCGATGA
CCAACCAGCCGCTCGTGCCGCGCCCGACGCCTGTGCGCTTCGTCGGCCTCCTGAATTTCGAGCGCGTCTTCACCGATCCG
CTGTTCTGGACCTCGCTGTGGAACGTCACGCGCTTCACCGTCTGGGTGCTGCCGCTGCAGTGCGGCCTCGCCTTCCTGAC
CGCGCTACTTTTGCATCAGAAGCTGCCGATGCAAAACCTGCTGCGCGGCCTGTTCTTCCTGCCGGCGATCACCTCCATGG
TGGTGGTCTGCGTCATCTGGGGCACGCTTTTCCAGTATCCGAGCGGCCCGCTCAACCAGATCGTCGGTTTCCTTTCCGGC
GGCACGATTCAGCCGATCGACTGGCTCGGCGACCCCAACTGGGCGATGTTCTCCATCGTGTTGCTTTCAGCCTGGCAGGC
CTATGGCTTTCAGATGATCATCTATCTCGCCGGCCTGCAGGGCATTCCCGAAGAACTATACGATGCAGCCCGCATCGACG
GGGCAAGCGCGCTGCGCCGCTTCTGGCACGTCACCATGCCCGGCCTTCGCCCGACCCATGTCTTCGTGCTGGTCATCACC
ACGATCCAGGCCTTCAAGCTCTATACGCAGGTGGCGATCCTCACCCAGGGCGGCCCGAACGAAAGCACCGAAACCGTTGT
CCACTACATGGTGCGCGCCGGCTTCGAGGAGCAGAAACTCGGCTACGCATCGGCCGTTTCCGTCATCCTCTTCGTCATCG
TTCTTCTGATCGCGCTCCTGCAACGCAAACTCCTGAGGCGCTTCGATGTCTGA

Upstream 100 bases:

>100_bases
ACCCGCCCTTCGACGAGCAGCAGTAAGGGGTTTTGACGGGGGCCGGCTCGTCCTGCCGGCCCTGGACCATCTCGGGAGGA
TGACCGATGAGGAGGAAACA

Downstream 100 bases:

>100_bases
TCTCGCTTTGACCCAGCCCGTCCCGCTGGCAATCGCAAGGGGCAACGGCAAGAGAAGCCTGCGCATCGTGCAGAGCCTCT
GCATCCTGGTCATCGCGCTG

Product: putative transmembrane permease transporter component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTLQQTSTPALRRPAKRRDNKRLWQEMAMIAPAFLLMAIFLITPFLLSFWTAMTNQPLVPRPTPVRFVGLLNFERVFTDP
LFWTSLWNVTRFTVWVLPLQCGLAFLTALLLHQKLPMQNLLRGLFFLPAITSMVVVCVIWGTLFQYPSGPLNQIVGFLSG
GTIQPIDWLGDPNWAMFSIVLLSAWQAYGFQMIIYLAGLQGIPEELYDAARIDGASALRRFWHVTMPGLRPTHVFVLVIT
TIQAFKLYTQVAILTQGGPNESTETVVHYMVRAGFEEQKLGYASAVSVILFVIVLLIALLQRKLLRRFDV

Sequences:

>Translated_310_residues
MTLQQTSTPALRRPAKRRDNKRLWQEMAMIAPAFLLMAIFLITPFLLSFWTAMTNQPLVPRPTPVRFVGLLNFERVFTDP
LFWTSLWNVTRFTVWVLPLQCGLAFLTALLLHQKLPMQNLLRGLFFLPAITSMVVVCVIWGTLFQYPSGPLNQIVGFLSG
GTIQPIDWLGDPNWAMFSIVLLSAWQAYGFQMIIYLAGLQGIPEELYDAARIDGASALRRFWHVTMPGLRPTHVFVLVIT
TIQAFKLYTQVAILTQGGPNESTETVVHYMVRAGFEEQKLGYASAVSVILFVIVLLIALLQRKLLRRFDV
>Mature_309_residues
TLQQTSTPALRRPAKRRDNKRLWQEMAMIAPAFLLMAIFLITPFLLSFWTAMTNQPLVPRPTPVRFVGLLNFERVFTDPL
FWTSLWNVTRFTVWVLPLQCGLAFLTALLLHQKLPMQNLLRGLFFLPAITSMVVVCVIWGTLFQYPSGPLNQIVGFLSGG
TIQPIDWLGDPNWAMFSIVLLSAWQAYGFQMIIYLAGLQGIPEELYDAARIDGASALRRFWHVTMPGLRPTHVFVLVITT
IQAFKLYTQVAILTQGGPNESTETVVHYMVRAGFEEQKLGYASAVSVILFVIVLLIALLQRKLLRRFDV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=248, Percent_Identity=31.0483870967742, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1789861, Length=297, Percent_Identity=27.9461279461279, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1790465, Length=260, Percent_Identity=27.6923076923077, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35188; Mature: 35057

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQQTSTPALRRPAKRRDNKRLWQEMAMIAPAFLLMAIFLITPFLLSFWTAMTNQPLVP
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RPTPVRFVGLLNFERVFTDPLFWTSLWNVTRFTVWVLPLQCGLAFLTALLLHQKLPMQNL
CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
LRGLFFLPAITSMVVVCVIWGTLFQYPSGPLNQIVGFLSGGTIQPIDWLGDPNWAMFSIV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHH
LLSAWQAYGFQMIIYLAGLQGIPEELYDAARIDGASALRRFWHVTMPGLRPTHVFVLVIT
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
TIQAFKLYTQVAILTQGGPNESTETVVHYMVRAGFEEQKLGYASAVSVILFVIVLLIALL
HHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QRKLLRRFDV
HHHHHHHCCC
>Mature Secondary Structure 
TLQQTSTPALRRPAKRRDNKRLWQEMAMIAPAFLLMAIFLITPFLLSFWTAMTNQPLVP
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC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HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]