| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116249187
Identifier: 116249187
GI number: 116249187
Start: 568406
End: 568984
Strand: Direct
Name: 116249187
Synonym: pRL120523
Alternate gene names: NA
Gene position: 568406-568984 (Clockwise)
Preceding gene: 116249186
Following gene: 116249188
Centisome position: 65.33
GC content: 61.49
Gene sequence:
>579_bases TTGCAGGAATTCCTCAATGATGTCGGCGGGCTGATGTTGTCGGCCGAGGCTCCTGCCGTCGCCAGTTTCGTCGCGGGCAA GGTCCTCCAGAAACTGCTCAAGACCGGCAAGGTGCGTCCGGAGGGCGGGCCTCTTCCCGGCGCGCCCGAAGGGCTTGATG ACGCCATCGGCCATCTTGCAAAATCGGGACGGAAATACGAGGCGATCGCCGGCCAGTTTCAGAGTCTCGCCGACAAGCTG CTCTGGAGACGCGGCCGCTCCGGTCCGTTCGCAAGCCTGAATTTTGGCAATACGCACTCCCATGCCGTCATGGTCGGTCC TGGCGGCATGGAGGAACGCGCCGATCTCAGGGTCGGCGTGATCTATATGGATCGCTATACAAGATTTCCCGACCATGTTC AGACGCAGCCCCGCGCCTTCATTCTGCTTTCGCCGGGTGAAATCCGCCTTGGCGATTCCGAGTGGTTCTCTGCTGGTGTC GGTACCGTCTTTGCGAATGACGCCGGCGAATCCTTCGCGATAAGATGCACAGCCCGGCCGCTGCTAGCGGTCTGGTGCCA GGTTGAGCGGGAGAGGTGA
Upstream 100 bases:
>100_bases ACGTCCAATGAAACCTGGTGCCGACCTTCTCCTGCACGATGACGAGAAGCCGGCATACATACGGCTGCACGACATCGGGA GGGAAAGACGTTCTCGGCCG
Downstream 100 bases:
>100_bases TGGGGTCCTTGGCGAAAATGAGCCTGAGATGAATGAAAAGCGCGAAGGCGAGAGCATGAAATCTCGGCTGTGACGCAGCA GCAGATCGGTGAGAAGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MQEFLNDVGGLMLSAEAPAVASFVAGKVLQKLLKTGKVRPEGGPLPGAPEGLDDAIGHLAKSGRKYEAIAGQFQSLADKL LWRRGRSGPFASLNFGNTHSHAVMVGPGGMEERADLRVGVIYMDRYTRFPDHVQTQPRAFILLSPGEIRLGDSEWFSAGV GTVFANDAGESFAIRCTARPLLAVWCQVERER
Sequences:
>Translated_192_residues MQEFLNDVGGLMLSAEAPAVASFVAGKVLQKLLKTGKVRPEGGPLPGAPEGLDDAIGHLAKSGRKYEAIAGQFQSLADKL LWRRGRSGPFASLNFGNTHSHAVMVGPGGMEERADLRVGVIYMDRYTRFPDHVQTQPRAFILLSPGEIRLGDSEWFSAGV GTVFANDAGESFAIRCTARPLLAVWCQVERER >Mature_192_residues MQEFLNDVGGLMLSAEAPAVASFVAGKVLQKLLKTGKVRPEGGPLPGAPEGLDDAIGHLAKSGRKYEAIAGQFQSLADKL LWRRGRSGPFASLNFGNTHSHAVMVGPGGMEERADLRVGVIYMDRYTRFPDHVQTQPRAFILLSPGEIRLGDSEWFSAGV GTVFANDAGESFAIRCTARPLLAVWCQVERER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20782; Mature: 20782
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFLNDVGGLMLSAEAPAVASFVAGKVLQKLLKTGKVRPEGGPLPGAPEGLDDAIGHLA CHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH KSGRKYEAIAGQFQSLADKLLWRRGRSGPFASLNFGNTHSHAVMVGPGGMEERADLRVGV HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEE IYMDRYTRFPDHVQTQPRAFILLSPGEIRLGDSEWFSAGVGTVFANDAGESFAIRCTARP EEECCCCCCCCHHCCCCCEEEEECCCCEEECCHHHHHCCCCEEEECCCCCEEEEEECCCH LLAVWCQVERER HHHHHHHHHCCC >Mature Secondary Structure MQEFLNDVGGLMLSAEAPAVASFVAGKVLQKLLKTGKVRPEGGPLPGAPEGLDDAIGHLA CHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH KSGRKYEAIAGQFQSLADKLLWRRGRSGPFASLNFGNTHSHAVMVGPGGMEERADLRVGV HCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEE IYMDRYTRFPDHVQTQPRAFILLSPGEIRLGDSEWFSAGVGTVFANDAGESFAIRCTARP EEECCCCCCCCHHCCCCCEEEEECCCCEEECCHHHHHCCCCEEEECCCCCEEEEEECCCH LLAVWCQVERER HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA