Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

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The map label for this gene is 116249146

Identifier: 116249146

GI number: 116249146

Start: 523660

End: 525162

Strand: Direct

Name: 116249146

Synonym: pRL120482

Alternate gene names: NA

Gene position: 523660-525162 (Clockwise)

Preceding gene: 116249145

Following gene: 116249147

Centisome position: 60.19

GC content: 58.35

Gene sequence:

>1503_bases
ATGAGCATCCCGCGCGACAATTACGTCGGCGAACCCGACTATCCGGCGACCTGGACGACCAGGCAGCCGCGCGAAGGTTT
GCGTGATCTTGACGAGGCAAAGATCGTCTCGCTGTCGCCGGATGTTTGCCTGACGCCGGTCGGCTCCTCGGTTGTCCCCA
TCCCGTACCCGATCGTCGACTATTGCGGGCACGACATGGGATATACGCCTTCCGTCCTCTTCACCGGCAAGAAGGCCATG
GTCATGCGATCCCGTACGACGCACGTCCATGGCGATGCGCCGGGAACGAGAAAGGGTGTCAAATCCGGCACCGTAGAAAA
TGTTTGCGAACCGATCGAGCATGCCGACCAGGTGCGCGCCGAGAGTTCTCATGTCATCCGGCATCTCGACCGCTTCTGGA
TGAACAATCGGAATACGCAGGGCGAAGCGATCTTCGTGCGTGGGACGCAGACATATGCGCCGCCGAAAGACGATGATCCT
GTCCGAGGATCGCTGCGCTGGAACGGCAGCGATGAAGGCAAGATCATGAGCGATGCCTCGCCGGAGCTGCTGGTGATGGG
CGCACAATATGCGCAGGCAGCACCGGCGACGGTACCTCAAACGGTTCCTGCGCCAGTTCGACCCGCCCCGGTGCCGCGAC
CCCCGGGGCAGGTCATCCGGCCGAATGTTCCACAGTGGAATAGGCCTCCACCCCGGCCGACCATCAAAGTCGGTAAATGG
GTCGGAAGGCTCGGCCGATTTGGTAGGGCAATGACTGGTATCGGAGCTTTTATCGAGGGTATGTGGCCAACCTCGACGGC
AATGCCGTGGTATGATGAAATGCCACAAGATGATTTCGAACGGGCGCTTTTCCGGAAGGCACGCGAACTTGAGGAGCAAG
GCGTCGACGTTGATGACGTTCAGGAGTGGTTCCGATCCGAGCGCGCAGAGAACGCACGACGCCGGAGGCAGCAGGAGACA
GAAGAACGGCAGCAACCGCAACCTCTACCCCAGACGCAGGGTGCGCGCGTTGATGAGGAAGGCTCACAACGTCGATGCAT
TGTTGGCCCCTACGAGGAGATCGAGCCGATATGTCGGGGCAATGCTCACCATATCGTTCCTGATATGGCCTATCGATTAG
GGCGGCGACCTGGCAAATCCGAATATGATTCCACAGAGAATCGTATTCCCAACGCACCGACGCTTAACCAGGGGATGTCG
ATTTGTTTGCTAAGTCGGCAGCACGGAAGCGATAGCGAAGGATTGCATGGAATACTTCGACAACGGTTTGCAGAACTCGC
AAGCCCTGTACCGGGGACAGCGCCTATGGGGGCAATATTAGCTGAAAGTATCAAAGTGATCGAGGATATTCCGGATTTGC
CGGAAGAATGCAAAGCGCTAGCTACAGCCATGGCAACAGGCCAGGTCGCGTCAAAAACCGGATTTGCCGCTCCTGGGCGA
ACGAGGGAACGGCCACTTCCGTCCGGCGAAGCCGAAACAGTACTGAGAAGGGGACATTATTGA

Upstream 100 bases:

>100_bases
GGGCACGCTTTCCCCTTCAGGAGGCCGGCGAAACATCGCTGACGTTGACGCGGGTCCAAGTCAAAGCGACGGCCGATGCT
GACGCCGATGAGGTTGCGGC

Downstream 100 bases:

>100_bases
TGAACGGCAGTGACTGGAAGGCAACAATTCAAGCCGCTGTGGCGTTTGATGTCGACCGCTTTGCGATATGTGTTGGCGAG
CTTGAATACGATGATCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MSIPRDNYVGEPDYPATWTTRQPREGLRDLDEAKIVSLSPDVCLTPVGSSVVPIPYPIVDYCGHDMGYTPSVLFTGKKAM
VMRSRTTHVHGDAPGTRKGVKSGTVENVCEPIEHADQVRAESSHVIRHLDRFWMNNRNTQGEAIFVRGTQTYAPPKDDDP
VRGSLRWNGSDEGKIMSDASPELLVMGAQYAQAAPATVPQTVPAPVRPAPVPRPPGQVIRPNVPQWNRPPPRPTIKVGKW
VGRLGRFGRAMTGIGAFIEGMWPTSTAMPWYDEMPQDDFERALFRKARELEEQGVDVDDVQEWFRSERAENARRRRQQET
EERQQPQPLPQTQGARVDEEGSQRRCIVGPYEEIEPICRGNAHHIVPDMAYRLGRRPGKSEYDSTENRIPNAPTLNQGMS
ICLLSRQHGSDSEGLHGILRQRFAELASPVPGTAPMGAILAESIKVIEDIPDLPEECKALATAMATGQVASKTGFAAPGR
TRERPLPSGEAETVLRRGHY

Sequences:

>Translated_500_residues
MSIPRDNYVGEPDYPATWTTRQPREGLRDLDEAKIVSLSPDVCLTPVGSSVVPIPYPIVDYCGHDMGYTPSVLFTGKKAM
VMRSRTTHVHGDAPGTRKGVKSGTVENVCEPIEHADQVRAESSHVIRHLDRFWMNNRNTQGEAIFVRGTQTYAPPKDDDP
VRGSLRWNGSDEGKIMSDASPELLVMGAQYAQAAPATVPQTVPAPVRPAPVPRPPGQVIRPNVPQWNRPPPRPTIKVGKW
VGRLGRFGRAMTGIGAFIEGMWPTSTAMPWYDEMPQDDFERALFRKARELEEQGVDVDDVQEWFRSERAENARRRRQQET
EERQQPQPLPQTQGARVDEEGSQRRCIVGPYEEIEPICRGNAHHIVPDMAYRLGRRPGKSEYDSTENRIPNAPTLNQGMS
ICLLSRQHGSDSEGLHGILRQRFAELASPVPGTAPMGAILAESIKVIEDIPDLPEECKALATAMATGQVASKTGFAAPGR
TRERPLPSGEAETVLRRGHY
>Mature_499_residues
SIPRDNYVGEPDYPATWTTRQPREGLRDLDEAKIVSLSPDVCLTPVGSSVVPIPYPIVDYCGHDMGYTPSVLFTGKKAMV
MRSRTTHVHGDAPGTRKGVKSGTVENVCEPIEHADQVRAESSHVIRHLDRFWMNNRNTQGEAIFVRGTQTYAPPKDDDPV
RGSLRWNGSDEGKIMSDASPELLVMGAQYAQAAPATVPQTVPAPVRPAPVPRPPGQVIRPNVPQWNRPPPRPTIKVGKWV
GRLGRFGRAMTGIGAFIEGMWPTSTAMPWYDEMPQDDFERALFRKARELEEQGVDVDDVQEWFRSERAENARRRRQQETE
ERQQPQPLPQTQGARVDEEGSQRRCIVGPYEEIEPICRGNAHHIVPDMAYRLGRRPGKSEYDSTENRIPNAPTLNQGMSI
CLLSRQHGSDSEGLHGILRQRFAELASPVPGTAPMGAILAESIKVIEDIPDLPEECKALATAMATGQVASKTGFAAPGRT
RERPLPSGEAETVLRRGHY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55476; Mature: 55345

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIPRDNYVGEPDYPATWTTRQPREGLRDLDEAKIVSLSPDVCLTPVGSSVVPIPYPIVD
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCHHHH
YCGHDMGYTPSVLFTGKKAMVMRSRTTHVHGDAPGTRKGVKSGTVENVCEPIEHADQVRA
HCCCCCCCCCCEEECCCHHEEEECCCCEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH
ESSHVIRHLDRFWMNNRNTQGEAIFVRGTQTYAPPKDDDPVRGSLRWNGSDEGKIMSDAS
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEECCCC
PELLVMGAQYAQAAPATVPQTVPAPVRPAPVPRPPGQVIRPNVPQWNRPPPRPTIKVGKW
CCEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
VGRLGRFGRAMTGIGAFIEGMWPTSTAMPWYDEMPQDDFERALFRKARELEEQGVDVDDV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
QEWFRSERAENARRRRQQETEERQQPQPLPQTQGARVDEEGSQRRCIVGPYEEIEPICRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCC
NAHHIVPDMAYRLGRRPGKSEYDSTENRIPNAPTLNQGMSICLLSRQHGSDSEGLHGILR
CCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHCCCEEEEEECCCCCCCHHHHHHHH
QRFAELASPVPGTAPMGAILAESIKVIEDIPDLPEECKALATAMATGQVASKTGFAAPGR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCC
TRERPLPSGEAETVLRRGHY
CCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SIPRDNYVGEPDYPATWTTRQPREGLRDLDEAKIVSLSPDVCLTPVGSSVVPIPYPIVD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCHHHH
YCGHDMGYTPSVLFTGKKAMVMRSRTTHVHGDAPGTRKGVKSGTVENVCEPIEHADQVRA
HCCCCCCCCCCEEECCCHHEEEECCCCEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHH
ESSHVIRHLDRFWMNNRNTQGEAIFVRGTQTYAPPKDDDPVRGSLRWNGSDEGKIMSDAS
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCEECCCC
PELLVMGAQYAQAAPATVPQTVPAPVRPAPVPRPPGQVIRPNVPQWNRPPPRPTIKVGKW
CCEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
VGRLGRFGRAMTGIGAFIEGMWPTSTAMPWYDEMPQDDFERALFRKARELEEQGVDVDDV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCHHHH
QEWFRSERAENARRRRQQETEERQQPQPLPQTQGARVDEEGSQRRCIVGPYEEIEPICRG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHCC
NAHHIVPDMAYRLGRRPGKSEYDSTENRIPNAPTLNQGMSICLLSRQHGSDSEGLHGILR
CCCCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHCCCEEEEEECCCCCCCHHHHHHHH
QRFAELASPVPGTAPMGAILAESIKVIEDIPDLPEECKALATAMATGQVASKTGFAAPGR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHCCCCCCCCC
TRERPLPSGEAETVLRRGHY
CCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA