Definition Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence.
Accession NC_008378
Length 870,021

Click here to switch to the map view.

The map label for this gene is 116249147

Identifier: 116249147

GI number: 116249147

Start: 525159

End: 526274

Strand: Direct

Name: 116249147

Synonym: pRL120483

Alternate gene names: NA

Gene position: 525159-526274 (Clockwise)

Preceding gene: 116249146

Following gene: 116249148

Centisome position: 60.36

GC content: 52.96

Gene sequence:

>1116_bases
TTGATGAACGGCAGTGACTGGAAGGCAACAATTCAAGCCGCTGTGGCGTTTGATGTCGACCGCTTTGCGATATGTGTTGG
CGAGCTTGAATACGATGATCCATTTACTGCGATCATTTCTTATGATGGGCGATTTTCTCAGCCGTGGAGCAGAACGGATG
TTCAGCGCGAGATCGTCGATATCAGCTATATGGGAGCCGATCCTACGGAAGACCATGTCCCGGTAGCGCTCAGCAACGAG
GGCGACGTCTATGTGTTGAAGGACGAGCATGCGGAGCGATCGAAGATCCCCGGAGCTGGGATTCTCAGCGAAGATGCTGA
GGGTTTTGGGGCAGTCCATACGCTGGTCGTAGATGGACATAGCCAATATGTTGTCGGGGATAGCCGTCAACTCTATCGCA
GAGAGGGCTTTGGAACATGGCAACGGCTTTCTGCGAACAAATCCCGCGAGGACGGTTATGAGGCCGAACATTTTGGAAAG
GCGATTTCCTTGGACGGTTCGCTCATCGTCGAAAGTGTTCAAAGACCTTATTCTGCACCAAGCGCTGCGCAGCTCGATCC
CAAAAGCTGGGAAAATGTCAGCCCGGAGCAGTTCCTGAAGATGATGAAGGAACAACGGTCCGAGCGCGTTACAAGGCCAC
GCATCCAACGCGTGTATCATTATCTCGACGGCGGTTTCTCACGATTATCCCTCCCCGAAGATTGCGTGATTAGAGGGCTA
TACCGCGACCCGGAGCAGCGTATTTGGTTTTTGGGCGGGGGAGGTCTGATCCTGCAGGGAACCATCGAAGGAGGATTTGA
GAAGGTCGGCTTCCTCGGGGATACGGAAACGTTGTTCAGTGCCGCGTGGTGTCGTTCGGAGCTTTTTGCGGCCACAGACG
ACGGTCTTCGCCGATTTGACGGCCATAAGCTTGGCATCGTGAAACCCAAACTAAATTCCGCAGCTATAAACCGAAATATT
CCTGCACCTCTGAAAATTCAATCTTTCGATAACACGCTGATATATTTCGACAGGAAGCATGGCGTGTGCAGGTGGGACGG
GCAATCCTGGGATTGGTACGAGATCCCGCCGTCACTTCTGCAACGCGAGTTCAAAGGCTTGCCTGCCAGACAATAG

Upstream 100 bases:

>100_bases
GCCAGGTCGCGTCAAAAACCGGATTTGCCGCTCCTGGGCGAACGAGGGAACGGCCACTTCCGTCCGGCGAAGCCGAAACA
GTACTGAGAAGGGGACATTA

Downstream 100 bases:

>100_bases
GGCTCGTCTATCGTATCCTTGCAGCCATACCTGTTCATGGGCGGACATCGTCAGTACAGCCACCGGGATGCGGAGAAAGT
CCCTGATCGCGATTTGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MMNGSDWKATIQAAVAFDVDRFAICVGELEYDDPFTAIISYDGRFSQPWSRTDVQREIVDISYMGADPTEDHVPVALSNE
GDVYVLKDEHAERSKIPGAGILSEDAEGFGAVHTLVVDGHSQYVVGDSRQLYRREGFGTWQRLSANKSREDGYEAEHFGK
AISLDGSLIVESVQRPYSAPSAAQLDPKSWENVSPEQFLKMMKEQRSERVTRPRIQRVYHYLDGGFSRLSLPEDCVIRGL
YRDPEQRIWFLGGGGLILQGTIEGGFEKVGFLGDTETLFSAAWCRSELFAATDDGLRRFDGHKLGIVKPKLNSAAINRNI
PAPLKIQSFDNTLIYFDRKHGVCRWDGQSWDWYEIPPSLLQREFKGLPARQ

Sequences:

>Translated_371_residues
MMNGSDWKATIQAAVAFDVDRFAICVGELEYDDPFTAIISYDGRFSQPWSRTDVQREIVDISYMGADPTEDHVPVALSNE
GDVYVLKDEHAERSKIPGAGILSEDAEGFGAVHTLVVDGHSQYVVGDSRQLYRREGFGTWQRLSANKSREDGYEAEHFGK
AISLDGSLIVESVQRPYSAPSAAQLDPKSWENVSPEQFLKMMKEQRSERVTRPRIQRVYHYLDGGFSRLSLPEDCVIRGL
YRDPEQRIWFLGGGGLILQGTIEGGFEKVGFLGDTETLFSAAWCRSELFAATDDGLRRFDGHKLGIVKPKLNSAAINRNI
PAPLKIQSFDNTLIYFDRKHGVCRWDGQSWDWYEIPPSLLQREFKGLPARQ
>Mature_371_residues
MMNGSDWKATIQAAVAFDVDRFAICVGELEYDDPFTAIISYDGRFSQPWSRTDVQREIVDISYMGADPTEDHVPVALSNE
GDVYVLKDEHAERSKIPGAGILSEDAEGFGAVHTLVVDGHSQYVVGDSRQLYRREGFGTWQRLSANKSREDGYEAEHFGK
AISLDGSLIVESVQRPYSAPSAAQLDPKSWENVSPEQFLKMMKEQRSERVTRPRIQRVYHYLDGGFSRLSLPEDCVIRGL
YRDPEQRIWFLGGGGLILQGTIEGGFEKVGFLGDTETLFSAAWCRSELFAATDDGLRRFDGHKLGIVKPKLNSAAINRNI
PAPLKIQSFDNTLIYFDRKHGVCRWDGQSWDWYEIPPSLLQREFKGLPARQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41837; Mature: 41837

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNGSDWKATIQAAVAFDVDRFAICVGELEYDDPFTAIISYDGRFSQPWSRTDVQREIVD
CCCCCCHHHEEEEEEHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHEE
ISYMGADPTEDHVPVALSNEGDVYVLKDEHAERSKIPGAGILSEDAEGFGAVHTLVVDGH
EEEECCCCCCCCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEECC
SQYVVGDSRQLYRREGFGTWQRLSANKSREDGYEAEHFGKAISLDGSLIVESVQRPYSAP
CEEEECCCHHHHHHCCCCHHHHHCCCCCCCCCCCHHHCCCEEECCHHHHHHHHHCCCCCC
SAAQLDPKSWENVSPEQFLKMMKEQRSERVTRPRIQRVYHYLDGGFSRLSLPEDCVIRGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
YRDPEQRIWFLGGGGLILQGTIEGGFEKVGFLGDTETLFSAAWCRSELFAATDDGLRRFD
CCCCCCEEEEEECCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
GHKLGIVKPKLNSAAINRNIPAPLKIQSFDNTLIYFDRKHGVCRWDGQSWDWYEIPPSLL
CCEEEEECCCCCCHHHCCCCCCCEEEECCCCEEEEEECCCCEEEECCCCCCCEECCHHHH
QREFKGLPARQ
HHHHCCCCCCC
>Mature Secondary Structure
MMNGSDWKATIQAAVAFDVDRFAICVGELEYDDPFTAIISYDGRFSQPWSRTDVQREIVD
CCCCCCHHHEEEEEEHCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHEE
ISYMGADPTEDHVPVALSNEGDVYVLKDEHAERSKIPGAGILSEDAEGFGAVHTLVVDGH
EEEECCCCCCCCCCEEECCCCCEEEECCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEECC
SQYVVGDSRQLYRREGFGTWQRLSANKSREDGYEAEHFGKAISLDGSLIVESVQRPYSAP
CEEEECCCHHHHHHCCCCHHHHHCCCCCCCCCCCHHHCCCEEECCHHHHHHHHHCCCCCC
SAAQLDPKSWENVSPEQFLKMMKEQRSERVTRPRIQRVYHYLDGGFSRLSLPEDCVIRGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
YRDPEQRIWFLGGGGLILQGTIEGGFEKVGFLGDTETLFSAAWCRSELFAATDDGLRRFD
CCCCCCEEEEEECCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCC
GHKLGIVKPKLNSAAINRNIPAPLKIQSFDNTLIYFDRKHGVCRWDGQSWDWYEIPPSLL
CCEEEEECCCCCCHHHCCCCCCCEEEECCCCEEEEEECCCCEEEECCCCCCCEECCHHHH
QREFKGLPARQ
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA