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The map label for this gene is impH

Identifier: 116249133

GI number: 116249133

Start: 506142

End: 507143

Strand: Reverse

Name: impH

Synonym: pRL120468

Alternate gene names: NA

Gene position: 507143-506142 (Counterclockwise)

Preceding gene: 116249134

Following gene: 116249132

Centisome position: 58.29

GC content: 66.27

Gene sequence:

>1002_bases
ATGGATCTCCCGACCGCCCGCAAGCCAGACGCCCTTGCCGATCTGCTCGAACGCGACCCCGGCCGCTTCGAGCCGGTGAC
GGCCTTTCGCGTCGCGCAGGCTTCGGTGAGGGAAGGACGGCTTGATGTCGCCTCGCATGTCGGCGTCTCGCCGGCGCCTC
TTGCCGTCAGCGGATATAAGCGCAAGGGCGGCAGTGCCACCGTCCGCAGCGCGCTTGCCGGTCTCGTCGGGGCGCTCGGC
TCGATGCCGTCGGCCTATAACGACCTCGTCATGCGCGAGGAGCGCAACAGGTCGCGGGCGCTGGCGGGCTTCTTCGACAT
GTTCGGCGCGCGGATGGCGGAACTCTTCACTGACGCCTGCGAGAAATATCGTATCGCCAGGCGGCTGCGATGGGGCGGCG
CATGGGCAAACAACGCCTTCGTCACCACGCTCCTGTCACTCACCGGCTTCGGCACCAAACGTCTCGTCGAAAAGAGCGGC
GTCGACGAGGAACTGATCCTGCGTTTCTCGGGCTTCTTTGCCGCGCGCAACCGCAATGCCGTCAATCTCCGCGCCATGCT
CTGCGAATTCAGTGGCCTGCCGGTGGAGATCGAATTGTTCCGCGGCCGCTGGCTTACCATCCCGATCGAGGAGCGCAGCC
GCATCGGCCAGCCCCAGGGCGTCCAGCTTGGCGTCAATGCGACGGCAGGTGCTGCGATCCACGATTTCAGCGGCGGCTTT
CGCATCGTCATCGGTCCGCTCGGTTATGCCGACTACCTCTCGCTCGCGCCGGGCGGCCGCGCCATCACCGAACTCTTCGC
CCTGGCGCGGCTCTATGTCGGTGCGGCGCTCGAATTCGACATACAGGCGATCCTGAAGAAGGAGGACGTTCCCTTCTGCC
AGCTCGGACAGGCGGGCGATCCGCCGCGGCTTGGCTGGAACAGTTGGGCGAGGGTTGCGCCGGCTGCAAGCGACAGCGGC
GATGCAGTGATCGTCGAGCGCCTGTCGGTTCAGGCGCGGTGA

Upstream 100 bases:

>100_bases
GGCTCACCATTCGGATGAAGGGGCAATCGAGGCCGATCGCCCGGTGGCCGGCACGCGCCGCCGAACGCCCGCTTCTCTAA
GGAAGGATCGCTAGCCAACC

Downstream 100 bases:

>100_bases
GGAGACGAGGAATGCGGCTTGAACTGAAAGAGATCACCAGGGACGCGGCGGCGCCAGCAGGCCAGTCAAAATGGTTCTTC
GAACGCGGCCGGCGAACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Replication/Virulence Associated Protein; Type VI Secretion System Protein ImpH; Type VI Secretion System Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpG; Conserved Protein; Secreted Protein; Cytoplasmic Protein SciB

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MDLPTARKPDALADLLERDPGRFEPVTAFRVAQASVREGRLDVASHVGVSPAPLAVSGYKRKGGSATVRSALAGLVGALG
SMPSAYNDLVMREERNRSRALAGFFDMFGARMAELFTDACEKYRIARRLRWGGAWANNAFVTTLLSLTGFGTKRLVEKSG
VDEELILRFSGFFAARNRNAVNLRAMLCEFSGLPVEIELFRGRWLTIPIEERSRIGQPQGVQLGVNATAGAAIHDFSGGF
RIVIGPLGYADYLSLAPGGRAITELFALARLYVGAALEFDIQAILKKEDVPFCQLGQAGDPPRLGWNSWARVAPAASDSG
DAVIVERLSVQAR

Sequences:

>Translated_333_residues
MDLPTARKPDALADLLERDPGRFEPVTAFRVAQASVREGRLDVASHVGVSPAPLAVSGYKRKGGSATVRSALAGLVGALG
SMPSAYNDLVMREERNRSRALAGFFDMFGARMAELFTDACEKYRIARRLRWGGAWANNAFVTTLLSLTGFGTKRLVEKSG
VDEELILRFSGFFAARNRNAVNLRAMLCEFSGLPVEIELFRGRWLTIPIEERSRIGQPQGVQLGVNATAGAAIHDFSGGF
RIVIGPLGYADYLSLAPGGRAITELFALARLYVGAALEFDIQAILKKEDVPFCQLGQAGDPPRLGWNSWARVAPAASDSG
DAVIVERLSVQAR
>Mature_333_residues
MDLPTARKPDALADLLERDPGRFEPVTAFRVAQASVREGRLDVASHVGVSPAPLAVSGYKRKGGSATVRSALAGLVGALG
SMPSAYNDLVMREERNRSRALAGFFDMFGARMAELFTDACEKYRIARRLRWGGAWANNAFVTTLLSLTGFGTKRLVEKSG
VDEELILRFSGFFAARNRNAVNLRAMLCEFSGLPVEIELFRGRWLTIPIEERSRIGQPQGVQLGVNATAGAAIHDFSGGF
RIVIGPLGYADYLSLAPGGRAITELFALARLYVGAALEFDIQAILKKEDVPFCQLGQAGDPPRLGWNSWARVAPAASDSG
DAVIVERLSVQAR

Specific function: Unknown

COG id: COG3520

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36016; Mature: 36016

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLPTARKPDALADLLERDPGRFEPVTAFRVAQASVREGRLDVASHVGVSPAPLAVSGYK
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCC
RKGGSATVRSALAGLVGALGSMPSAYNDLVMREERNRSRALAGFFDMFGARMAELFTDAC
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYRIARRLRWGGAWANNAFVTTLLSLTGFGTKRLVEKSGVDEELILRFSGFFAARNRNA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
VNLRAMLCEFSGLPVEIELFRGRWLTIPIEERSRIGQPQGVQLGVNATAGAAIHDFSGGF
EEHHHHHHHCCCCCEEEEEECCEEEEEEHHHHHHCCCCCCEEEECCCCCCCEEEECCCCE
RIVIGPLGYADYLSLAPGGRAITELFALARLYVGAALEFDIQAILKKEDVPFCQLGQAGD
EEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
PPRLGWNSWARVAPAASDSGDAVIVERLSVQAR
CCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MDLPTARKPDALADLLERDPGRFEPVTAFRVAQASVREGRLDVASHVGVSPAPLAVSGYK
CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEECCC
RKGGSATVRSALAGLVGALGSMPSAYNDLVMREERNRSRALAGFFDMFGARMAELFTDAC
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKYRIARRLRWGGAWANNAFVTTLLSLTGFGTKRLVEKSGVDEELILRFSGFFAARNRNA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
VNLRAMLCEFSGLPVEIELFRGRWLTIPIEERSRIGQPQGVQLGVNATAGAAIHDFSGGF
EEHHHHHHHCCCCCEEEEEECCEEEEEEHHHHHHCCCCCCEEEECCCCCCCEEEECCCCE
RIVIGPLGYADYLSLAPGGRAITELFALARLYVGAALEFDIQAILKKEDVPFCQLGQAGD
EEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
PPRLGWNSWARVAPAASDSGDAVIVERLSVQAR
CCCCCCCCHHHCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA