| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is impI
Identifier: 116249132
GI number: 116249132
Start: 504931
End: 506130
Strand: Reverse
Name: impI
Synonym: pRL120467
Alternate gene names: NA
Gene position: 506130-504931 (Counterclockwise)
Preceding gene: 116249133
Following gene: 116249131
Centisome position: 58.17
GC content: 64.83
Gene sequence:
>1200_bases ATGCGGCTTGAACTGAAAGAGATCACCAGGGACGCGGCGGCGCCAGCAGGCCAGTCAAAATGGTTCTTCGAACGCGGCCG GCGAACGCTCGGCCGGGCACCGGATTGCGACTGGCGCCTGCCGGAGGATCGGCGCTCCGTTTCGAAGCTCCATTGCATCA TCGAGCGCGACCGCGAAGGCTTCCTGCTGCGCGACCAGAGCGCAAACGGCTCCCGGGTCGACGGCGTCGCCGTCCATGAG GGCCAGATCGTGCGGCTTGCCGACAGGTCGCGGCTGGAGTTAGGCGGACTTGCCTTTTCCGTCCACATATCGGGCGAGAA AGACCGCGAGATAGAGGACCCCGATGCCGGTCTCATGCTGAGTGACGAACCGCTGACCATCTCCGCAATCCTGGCCGATA TCGCTCCGGGCGGTCATACCGCAAACGGCATCCTTGGCGAGCGTGCGGTCGATGATTGGGGCCTTCCCGAAAAGGCCGGG AAAAAGGGAGCGGCCTCATCCCGCAATGTCGAGATCGGCTGGAGCGGCCCTCCGGAGATCCGCTCAGTCACCCAGCTTCT GCCGGAGGATTGGAATTCGGAAGAAACCGAATATGGCAGCCACCTGGAACATGGCTCCGCCACCCATGTTTCGGCGCCCA TCACTCAGCGCCGGCCGGCCCCGGTGATCGAGATCGTCAGCGACAACGATCCGCAGGCAGAGCCGGAGGCCGAGGAGTTT CCGGCACTGACGATCGGCCGGCCCGAAGCCTTCGCCGATCGCCTGGAGCCACTGCTTGCCCGGCTCGAGGAGGCTGTCCA GAATAGCTATGCCGTTTTCGAGATCAATGCGCCATCCGCCGCCAGCGAGCCGGTTTTCCTTGCCGCCAGCAGCAGGGAGG AAGCGCTTTTTGCCCGCACCGAAACCCTGCTCGGGCAACAGCTCAAGCTCAATTCGGCGCTTGAGGCTCTGGTTCAGACA GCGGGCCGGCTGGAGCCGCGCATGCTTGAGGCGCGGGTCGAGACCGGCGCCTGGCGCCTGCCCTGGGGCCGAGACCGGGC CTATTGGCGCGCCTACCGGGCACAATTCGAACAGGACGGCAGGAGCCGGTCGATCCATGACGTTTTCCGCGACGCAATGA CGGGGGCGGTAAACGGCACGCAGGCAGGGCCTCGTCCGCAAGACGGGCAGGAAGGAAAAGACGCGCATCATGAGGAATGA
Upstream 100 bases:
>100_bases GCTGGAACAGTTGGGCGAGGGTTGCGCCGGCTGCAAGCGACAGCGGCGATGCAGTGATCGTCGAGCGCCTGTCGGTTCAG GCGCGGTGAGGAGACGAGGA
Downstream 100 bases:
>100_bases AAACCGGGTGGCCTGGAGCGAAGGCATGTTCCTTCGCGTGCAGCATTTTCAGCAGGCGGACCGCTGGACCGAGCGGCTCG TGCGCACGGCGACGCACGGC
Product: FHA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MRLELKEITRDAAAPAGQSKWFFERGRRTLGRAPDCDWRLPEDRRSVSKLHCIIERDREGFLLRDQSANGSRVDGVAVHE GQIVRLADRSRLELGGLAFSVHISGEKDREIEDPDAGLMLSDEPLTISAILADIAPGGHTANGILGERAVDDWGLPEKAG KKGAASSRNVEIGWSGPPEIRSVTQLLPEDWNSEETEYGSHLEHGSATHVSAPITQRRPAPVIEIVSDNDPQAEPEAEEF PALTIGRPEAFADRLEPLLARLEEAVQNSYAVFEINAPSAASEPVFLAASSREEALFARTETLLGQQLKLNSALEALVQT AGRLEPRMLEARVETGAWRLPWGRDRAYWRAYRAQFEQDGRSRSIHDVFRDAMTGAVNGTQAGPRPQDGQEGKDAHHEE
Sequences:
>Translated_399_residues MRLELKEITRDAAAPAGQSKWFFERGRRTLGRAPDCDWRLPEDRRSVSKLHCIIERDREGFLLRDQSANGSRVDGVAVHE GQIVRLADRSRLELGGLAFSVHISGEKDREIEDPDAGLMLSDEPLTISAILADIAPGGHTANGILGERAVDDWGLPEKAG KKGAASSRNVEIGWSGPPEIRSVTQLLPEDWNSEETEYGSHLEHGSATHVSAPITQRRPAPVIEIVSDNDPQAEPEAEEF PALTIGRPEAFADRLEPLLARLEEAVQNSYAVFEINAPSAASEPVFLAASSREEALFARTETLLGQQLKLNSALEALVQT AGRLEPRMLEARVETGAWRLPWGRDRAYWRAYRAQFEQDGRSRSIHDVFRDAMTGAVNGTQAGPRPQDGQEGKDAHHEE >Mature_399_residues MRLELKEITRDAAAPAGQSKWFFERGRRTLGRAPDCDWRLPEDRRSVSKLHCIIERDREGFLLRDQSANGSRVDGVAVHE GQIVRLADRSRLELGGLAFSVHISGEKDREIEDPDAGLMLSDEPLTISAILADIAPGGHTANGILGERAVDDWGLPEKAG KKGAASSRNVEIGWSGPPEIRSVTQLLPEDWNSEETEYGSHLEHGSATHVSAPITQRRPAPVIEIVSDNDPQAEPEAEEF PALTIGRPEAFADRLEPLLARLEEAVQNSYAVFEINAPSAASEPVFLAASSREEALFARTETLLGQQLKLNSALEALVQT AGRLEPRMLEARVETGAWRLPWGRDRAYWRAYRAQFEQDGRSRSIHDVFRDAMTGAVNGTQAGPRPQDGQEGKDAHHEE
Specific function: Unknown
COG id: COG3456
COG function: function code T; Uncharacterized conserved protein, contains FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43992; Mature: 43992
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50006 FHA_DOMAIN ; PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLELKEITRDAAAPAGQSKWFFERGRRTLGRAPDCDWRLPEDRRSVSKLHCIIERDREG CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC FLLRDQSANGSRVDGVAVHEGQIVRLADRSRLELGGLAFSVHISGEKDREIEDPDAGLML CEEEECCCCCCCCCCEEECCCCEEEECCCCCEEECCEEEEEEECCCCCCCCCCCCCCEEE SDEPLTISAILADIAPGGHTANGILGERAVDDWGLPEKAGKKGAASSRNVEIGWSGPPEI CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCHHH RSVTQLLPEDWNSEETEYGSHLEHGSATHVSAPITQRRPAPVIEIVSDNDPQAEPEAEEF HHHHHHCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCHHHC PALTIGRPEAFADRLEPLLARLEEAVQNSYAVFEINAPSAASEPVFLAASSREEALFART CEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHH ETLLGQQLKLNSALEALVQTAGRLEPRMLEARVETGAWRLPWGRDRAYWRAYRAQFEQDG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC RSRSIHDVFRDAMTGAVNGTQAGPRPQDGQEGKDAHHEE CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRLELKEITRDAAAPAGQSKWFFERGRRTLGRAPDCDWRLPEDRRSVSKLHCIIERDREG CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC FLLRDQSANGSRVDGVAVHEGQIVRLADRSRLELGGLAFSVHISGEKDREIEDPDAGLML CEEEECCCCCCCCCCEEECCCCEEEECCCCCEEECCEEEEEEECCCCCCCCCCCCCCEEE SDEPLTISAILADIAPGGHTANGILGERAVDDWGLPEKAGKKGAASSRNVEIGWSGPPEI CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCHHH RSVTQLLPEDWNSEETEYGSHLEHGSATHVSAPITQRRPAPVIEIVSDNDPQAEPEAEEF HHHHHHCCCCCCCCHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEECCCCCCCCCCHHHC PALTIGRPEAFADRLEPLLARLEEAVQNSYAVFEINAPSAASEPVFLAASSREEALFART CEEECCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHH ETLLGQQLKLNSALEALVQTAGRLEPRMLEARVETGAWRLPWGRDRAYWRAYRAQFEQDG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC RSRSIHDVFRDAMTGAVNGTQAGPRPQDGQEGKDAHHEE CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA