| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is impG
Identifier: 116249134
GI number: 116249134
Start: 507164
End: 508945
Strand: Reverse
Name: impG
Synonym: pRL120469
Alternate gene names: NA
Gene position: 508945-507164 (Counterclockwise)
Preceding gene: 116249135
Following gene: 116249133
Centisome position: 58.5
GC content: 64.03
Gene sequence:
>1782_bases ATGGCTGAAGGTTTCCTGCACCGTTACAATGAGGAATTGCTGGCGCTCCGCCGCCGGGCCGCGCGCTTTGCCGATGCCTT CCCGAAGATCGCCGGCCGCCTGCGCATGACCGGCGACGTCGCCGACGACCCGCATGTGGAACGCCTGATCCAGAGTTTCG CCTATTCGGCCGCCCGCGTCCGTCAGAAGCTGGACGACGAGTTTCCCGAACTGACCGACGGCCTTCTCGAAACGCTCTAT CCCCATTATCTGGCGCCGCTGCCCTCGATGAGCATCGTCAAGTTCCGCCCGAGCGACACGCTCGCCTCGGTCCAGACCGT GCCGCGCCATACGGAAATCCTAGCCGAGCCGGTGAGAGGCGAAGCTTGCCGCTTCCGCACCACGCAGGATGTCGAGATCG CGCCGATCGAAATCACCGGTGCTAATCTCTCCGGCCAGCCGATCAATGCGCCGCTTTCGCCCTATACCGGCGTTGCCGGT TGCCTCAGGCTGTCCATCCGCAGCCTCGATGCCCGAAAGCCGCTCGGCGGCCTTGGCATGAGCCGGCTGCGCCTGCACAT TCCGTCCCCCTGGCAGCAGGCAGTGGCGATCTACGAACTGCTTGCCAATCATACACTCGGCATCGCACTTGCCAAACATG CGGACGACCGTTCGCCGGTCTTCCTGCCGGCGGGCAATCTCAAACCGGTCGGCTTCGAACCAGAAGAGGCCATGCTGCCC TATCCGGCGCCGAGCTTCATCGGCTACCGGCTGCTAACCGAATTTTTCGCTCTGCCGCGCAAATTTCTCTTTCTCGACAT CGAAGGGTTCGATGCGTGGCGGGGGGAGACGCTGGAGCTCTTCGTCTACCTCGGGGAAAGCGACGCCAAGCTCGAACGCG CAGTCTCGGTCCGCGACTTCGCGCTCAATGCAACGCCCGTCGTCAACCTCTTCCGCCAGGTTTGCGAGCCGATCGCCATC GACGGCACCTGCACGGAATACCGCCTCCTGCCGGATGCGCGCCGCCAAAAGACCCGCGAGATCTATTCCATCGACCGCGT TCTCCTGACCGGATCGCGCGGCCAGGAGGAATTCTGCCAGCCGTTCTTCGGACGGTCGCAACGGGCTGGCACGAGCGCAA CCTACTGGCAGGCCTATCGCCGTTTCGACGAAGACGACAGGACCAGCGACATGGACATCGCCTTCGTCAACAGGCAGCGC CGTTCTTCAGGTCCTGTCGATGCGGTCGCAAGCGTCGATACGCTCTGCCTCAACCGCGACCTGCCGGAACAGCTTCCCTT CGGCGGCGGCCATCCATTCCTGCAGCTCGCTTCCGGCCATGAGGCGATCGCCAGCGTCGAAGCCCTGATCCCGCCGACGC CGTCGGTCAGGATGAACGATCAGGAAGGGCGGAACTGGCGGCTGATGTCGCATCTCATCCTCAATCACCTGTCGCTCTTC GACAATGACGGTGCGGCACTCAAGGATATCCTGTCGCTCTACGCCTTCCGGGATAGCCCCGAGACCAAGCAATTCGTCGA TGCGCTCGTCAGGATCAAGGCGGGCACTTCGACCGCCCGCCTCGGCAGCGGCGGCACGGTGCCCGGCACCGAGATCGCGC TTGAATTCGATCCGGCCGCCATCGACCGGCCCTCGGCCTTCCTGTTCGGCAGCGTGCTCGACCGCTTCTTCAGTCTCTAC GCCTCGGTCAACAGCTTCACCCGGCTCACCATTCGGATGAAGGGGCAATCGAGGCCGATCGCCCGGTGGCCGGCACGCGC CGCCGAACGCCCGCTTCTCTAA
Upstream 100 bases:
>100_bases CGCATCCAGGCGACCTTCAGCCTGCATGAAGGCATGCCGCCGATCAGCTTTGAGTCGACGATCGATCCCTCGACCCAGCG CTTCCTCGTGGAGGCGGCGC
Downstream 100 bases:
>100_bases GGAAGGATCGCTAGCCAACCATGGATCTCCCGACCGCCCGCAAGCCAGACGCCCTTGCCGATCTGCTCGAACGCGACCCC GGCCGCTTCGAGCCGGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MAEGFLHRYNEELLALRRRAARFADAFPKIAGRLRMTGDVADDPHVERLIQSFAYSAARVRQKLDDEFPELTDGLLETLY PHYLAPLPSMSIVKFRPSDTLASVQTVPRHTEILAEPVRGEACRFRTTQDVEIAPIEITGANLSGQPINAPLSPYTGVAG CLRLSIRSLDARKPLGGLGMSRLRLHIPSPWQQAVAIYELLANHTLGIALAKHADDRSPVFLPAGNLKPVGFEPEEAMLP YPAPSFIGYRLLTEFFALPRKFLFLDIEGFDAWRGETLELFVYLGESDAKLERAVSVRDFALNATPVVNLFRQVCEPIAI DGTCTEYRLLPDARRQKTREIYSIDRVLLTGSRGQEEFCQPFFGRSQRAGTSATYWQAYRRFDEDDRTSDMDIAFVNRQR RSSGPVDAVASVDTLCLNRDLPEQLPFGGGHPFLQLASGHEAIASVEALIPPTPSVRMNDQEGRNWRLMSHLILNHLSLF DNDGAALKDILSLYAFRDSPETKQFVDALVRIKAGTSTARLGSGGTVPGTEIALEFDPAAIDRPSAFLFGSVLDRFFSLY ASVNSFTRLTIRMKGQSRPIARWPARAAERPLL
Sequences:
>Translated_593_residues MAEGFLHRYNEELLALRRRAARFADAFPKIAGRLRMTGDVADDPHVERLIQSFAYSAARVRQKLDDEFPELTDGLLETLY PHYLAPLPSMSIVKFRPSDTLASVQTVPRHTEILAEPVRGEACRFRTTQDVEIAPIEITGANLSGQPINAPLSPYTGVAG CLRLSIRSLDARKPLGGLGMSRLRLHIPSPWQQAVAIYELLANHTLGIALAKHADDRSPVFLPAGNLKPVGFEPEEAMLP YPAPSFIGYRLLTEFFALPRKFLFLDIEGFDAWRGETLELFVYLGESDAKLERAVSVRDFALNATPVVNLFRQVCEPIAI DGTCTEYRLLPDARRQKTREIYSIDRVLLTGSRGQEEFCQPFFGRSQRAGTSATYWQAYRRFDEDDRTSDMDIAFVNRQR RSSGPVDAVASVDTLCLNRDLPEQLPFGGGHPFLQLASGHEAIASVEALIPPTPSVRMNDQEGRNWRLMSHLILNHLSLF DNDGAALKDILSLYAFRDSPETKQFVDALVRIKAGTSTARLGSGGTVPGTEIALEFDPAAIDRPSAFLFGSVLDRFFSLY ASVNSFTRLTIRMKGQSRPIARWPARAAERPLL >Mature_592_residues AEGFLHRYNEELLALRRRAARFADAFPKIAGRLRMTGDVADDPHVERLIQSFAYSAARVRQKLDDEFPELTDGLLETLYP HYLAPLPSMSIVKFRPSDTLASVQTVPRHTEILAEPVRGEACRFRTTQDVEIAPIEITGANLSGQPINAPLSPYTGVAGC LRLSIRSLDARKPLGGLGMSRLRLHIPSPWQQAVAIYELLANHTLGIALAKHADDRSPVFLPAGNLKPVGFEPEEAMLPY PAPSFIGYRLLTEFFALPRKFLFLDIEGFDAWRGETLELFVYLGESDAKLERAVSVRDFALNATPVVNLFRQVCEPIAID GTCTEYRLLPDARRQKTREIYSIDRVLLTGSRGQEEFCQPFFGRSQRAGTSATYWQAYRRFDEDDRTSDMDIAFVNRQRR SSGPVDAVASVDTLCLNRDLPEQLPFGGGHPFLQLASGHEAIASVEALIPPTPSVRMNDQEGRNWRLMSHLILNHLSLFD NDGAALKDILSLYAFRDSPETKQFVDALVRIKAGTSTARLGSGGTVPGTEIALEFDPAAIDRPSAFLFGSVLDRFFSLYA SVNSFTRLTIRMKGQSRPIARWPARAAERPLL
Specific function: Unknown
COG id: COG3519
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66092; Mature: 65961
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGFLHRYNEELLALRRRAARFADAFPKIAGRLRMTGDVADDPHVERLIQSFAYSAARV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHH RQKLDDEFPELTDGLLETLYPHYLAPLPSMSIVKFRPSDTLASVQTVPRHTEILAEPVRG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHCCCCC EACRFRTTQDVEIAPIEITGANLSGQPINAPLSPYTGVAGCLRLSIRSLDARKPLGGLGM CCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SRLRLHIPSPWQQAVAIYELLANHTLGIALAKHADDRSPVFLPAGNLKPVGFEPEEAMLP CCEEEECCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC YPAPSFIGYRLLTEFFALPRKFLFLDIEGFDAWRGETLELFVYLGESDAKLERAVSVRDF CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHH ALNATPVVNLFRQVCEPIAIDGTCTEYRLLPDARRQKTREIYSIDRVLLTGSRGQEEFCQ CCCCCHHHHHHHHHHCCEECCCCCCCEEECCHHHHHHHHHHHHHHHHEEECCCCCHHHHH PFFGRSQRAGTSATYWQAYRRFDEDDRTSDMDIAFVNRQRRSSGPVDAVASVDTLCLNRD HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHCCCCCCHHHHHHHHHHHCCC LPEQLPFGGGHPFLQLASGHEAIASVEALIPPTPSVRMNDQEGRNWRLMSHLILNHLSLF CHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH DNDGAALKDILSLYAFRDSPETKQFVDALVRIKAGTSTARLGSGGTVPGTEIALEFDPAA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCC IDRPSAFLFGSVLDRFFSLYASVNSFTRLTIRMKGQSRPIARWPARAAERPLL CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHCCHHHCCCCCC >Mature Secondary Structure AEGFLHRYNEELLALRRRAARFADAFPKIAGRLRMTGDVADDPHVERLIQSFAYSAARV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHHHH RQKLDDEFPELTDGLLETLYPHYLAPLPSMSIVKFRPSDTLASVQTVPRHTEILAEPVRG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCHHHHHHHCCCCC EACRFRTTQDVEIAPIEITGANLSGQPINAPLSPYTGVAGCLRLSIRSLDARKPLGGLGM CCEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC SRLRLHIPSPWQQAVAIYELLANHTLGIALAKHADDRSPVFLPAGNLKPVGFEPEEAMLP CCEEEECCCCHHHHHHHHHHHHCCHHEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC YPAPSFIGYRLLTEFFALPRKFLFLDIEGFDAWRGETLELFVYLGESDAKLERAVSVRDF CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHH ALNATPVVNLFRQVCEPIAIDGTCTEYRLLPDARRQKTREIYSIDRVLLTGSRGQEEFCQ CCCCCHHHHHHHHHHCCEECCCCCCCEEECCHHHHHHHHHHHHHHHHEEECCCCCHHHHH PFFGRSQRAGTSATYWQAYRRFDEDDRTSDMDIAFVNRQRRSSGPVDAVASVDTLCLNRD HHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHCCCCCCHHHHHHHHHHHCCC LPEQLPFGGGHPFLQLASGHEAIASVEALIPPTPSVRMNDQEGRNWRLMSHLILNHLSLF CHHHCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH DNDGAALKDILSLYAFRDSPETKQFVDALVRIKAGTSTARLGSGGTVPGTEIALEFDPAA CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEEECCCC IDRPSAFLFGSVLDRFFSLYASVNSFTRLTIRMKGQSRPIARWPARAAERPLL CCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA