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The map label for this gene is impJ

Identifier: 116249131

GI number: 116249131

Start: 503601

End: 504941

Strand: Reverse

Name: impJ

Synonym: pRL120466

Alternate gene names: NA

Gene position: 504941-503601 (Counterclockwise)

Preceding gene: 116249132

Following gene: 116249130

Centisome position: 58.04

GC content: 64.65

Gene sequence:

>1341_bases
ATGAGGAATGAAAACCGGGTGGCCTGGAGCGAAGGCATGTTCCTTCGCGTGCAGCATTTTCAGCAGGCGGACCGCTGGAC
CGAGCGGCTCGTGCGCACGGCGACGCACGGCCTGTCGCCCTATCCCTGGGGAGTGGCGGAAATCGGCATCGACCGCGGCG
CACTGGCGATCGGCCAATTCGCGCTGTCGAACCTGCGCGGCGTATTGCCGGACGGAACGCCGTTCGAAGCCCCTGTTGAT
ACCGACCTGCCGCCGCCGCTCGATCTCGACGAGAACACCAAGAATGCGGTCGTCTATCTCGCACTTCCCGCCCGTCAGCC
GGGCAAGGCCGATGTGGCGTTGAACGGCGGTGCCGCGCGCAACAGCGTCCGGCTCGTCGCGTCGCCCTATGAAGCGCCGG
ATGCCAATGTCGAGACCGACTTCATGGCGCCGATCGATGTCGGCCGTCTCAGCCTGCGCTATCTGAGGACCGGTGATGAA
CTCGCCGGCTACGAACTCATCGGACTTGCCCGTATCATCGAGGTGCGTTCCGACAGGGCCGTGATCCTCGATCCGGACTA
TATTGTGCCGAGCCTCAACTGTACGGCTGCTGCACGGCTCGGCGAGCTGATCACCGAACTGCTCGGCATCGTGCGCCACC
GCGCGGAGGCCATCGCCGAACGGATCGGCGATCCCACCATTCGAGGGACCGCGGAGGTCGGCGACTACCTGCTCTTACAG
ATGCTCAACCGCGCGGATCCGATGCTGAAACACATTTCGGCGAATGCGACGCGGATCCACCCCATCGTCTTTTACGAGAC
CTGCATCCAGCTTGCCGGCGAGCTCGCCACCTTCACGACCGACCGCAAGCGCGCGAGCGACTTCCCGCCTTACCGCCACG
ACGACCTGAAGGCGACGTTCGCGGCCGTCTTCGACGATCTGCGCGCCTCGCTGTCATCAGTGCTCGAACAGGCAGCCGTG
GCGATCGAGTTGGCCGAACGCCGGCATGGCGTCAGGATCGGTACGATCAACGACCGTTCGCTGCTGAGAGATGCCGGCTT
CGTACTGGCGGTCCGGGCCGAGATGCCGGCCGAAGACGTGCGCCGCAAGCTGCCGGCGCAGATCAAGATCGGCCCGGTTG
AGCGCATCGCCGACCTCGTCAACGTCGCGCTGCCGGGCATCCCCGTCCGGCCGCTGCCGGTGCTGCCACGCCAGCTCCCC
TATCGCTCCGGCACCATCTATTTCGAACTCGACACCAAGAACCCGCTTTGGAAACAACTCGACACTTCGGGCGCCATCGC
CGTGCATCTCGCCGGCGATTTTCCCGGGCTCGAAATAGAACTGTGGGCCCTTAGAGAATGA

Upstream 100 bases:

>100_bases
TCGATCCATGACGTTTTCCGCGACGCAATGACGGGGGCGGTAAACGGCACGCAGGCAGGGCCTCGTCCGCAAGACGGGCA
GGAAGGAAAAGACGCGCATC

Downstream 100 bases:

>100_bases
AGAACGAACCCGCCTCCACCTGGCAGAACCTGCCGACCATTGTCGAACTTACCGAGGACGGCACTCGGAAAAAGCAATCC
GCCCGCAAGATGGCGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MRNENRVAWSEGMFLRVQHFQQADRWTERLVRTATHGLSPYPWGVAEIGIDRGALAIGQFALSNLRGVLPDGTPFEAPVD
TDLPPPLDLDENTKNAVVYLALPARQPGKADVALNGGAARNSVRLVASPYEAPDANVETDFMAPIDVGRLSLRYLRTGDE
LAGYELIGLARIIEVRSDRAVILDPDYIVPSLNCTAAARLGELITELLGIVRHRAEAIAERIGDPTIRGTAEVGDYLLLQ
MLNRADPMLKHISANATRIHPIVFYETCIQLAGELATFTTDRKRASDFPPYRHDDLKATFAAVFDDLRASLSSVLEQAAV
AIELAERRHGVRIGTINDRSLLRDAGFVLAVRAEMPAEDVRRKLPAQIKIGPVERIADLVNVALPGIPVRPLPVLPRQLP
YRSGTIYFELDTKNPLWKQLDTSGAIAVHLAGDFPGLEIELWALRE

Sequences:

>Translated_446_residues
MRNENRVAWSEGMFLRVQHFQQADRWTERLVRTATHGLSPYPWGVAEIGIDRGALAIGQFALSNLRGVLPDGTPFEAPVD
TDLPPPLDLDENTKNAVVYLALPARQPGKADVALNGGAARNSVRLVASPYEAPDANVETDFMAPIDVGRLSLRYLRTGDE
LAGYELIGLARIIEVRSDRAVILDPDYIVPSLNCTAAARLGELITELLGIVRHRAEAIAERIGDPTIRGTAEVGDYLLLQ
MLNRADPMLKHISANATRIHPIVFYETCIQLAGELATFTTDRKRASDFPPYRHDDLKATFAAVFDDLRASLSSVLEQAAV
AIELAERRHGVRIGTINDRSLLRDAGFVLAVRAEMPAEDVRRKLPAQIKIGPVERIADLVNVALPGIPVRPLPVLPRQLP
YRSGTIYFELDTKNPLWKQLDTSGAIAVHLAGDFPGLEIELWALRE
>Mature_446_residues
MRNENRVAWSEGMFLRVQHFQQADRWTERLVRTATHGLSPYPWGVAEIGIDRGALAIGQFALSNLRGVLPDGTPFEAPVD
TDLPPPLDLDENTKNAVVYLALPARQPGKADVALNGGAARNSVRLVASPYEAPDANVETDFMAPIDVGRLSLRYLRTGDE
LAGYELIGLARIIEVRSDRAVILDPDYIVPSLNCTAAARLGELITELLGIVRHRAEAIAERIGDPTIRGTAEVGDYLLLQ
MLNRADPMLKHISANATRIHPIVFYETCIQLAGELATFTTDRKRASDFPPYRHDDLKATFAAVFDDLRASLSSVLEQAAV
AIELAERRHGVRIGTINDRSLLRDAGFVLAVRAEMPAEDVRRKLPAQIKIGPVERIADLVNVALPGIPVRPLPVLPRQLP
YRSGTIYFELDTKNPLWKQLDTSGAIAVHLAGDFPGLEIELWALRE

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49125; Mature: 49125

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNENRVAWSEGMFLRVQHFQQADRWTERLVRTATHGLSPYPWGVAEIGIDRGALAIGQF
CCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHH
ALSNLRGVLPDGTPFEAPVDTDLPPPLDLDENTKNAVVYLALPARQPGKADVALNGGAAR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCC
NSVRLVASPYEAPDANVETDFMAPIDVGRLSLRYLRTGDELAGYELIGLARIIEVRSDRA
CCEEEEECCCCCCCCCCCCCEECCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCE
VILDPDYIVPSLNCTAAARLGELITELLGIVRHRAEAIAERIGDPTIRGTAEVGDYLLLQ
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MLNRADPMLKHISANATRIHPIVFYETCIQLAGELATFTTDRKRASDFPPYRHDDLKATF
HHHHCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHH
AAVFDDLRASLSSVLEQAAVAIELAERRHGVRIGTINDRSLLRDAGFVLAVRAEMPAEDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCEEEEEECCCCHHHH
RRKLPAQIKIGPVERIADLVNVALPGIPVRPLPVLPRQLPYRSGTIYFELDTKNPLWKQL
HHHCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHC
DTSGAIAVHLAGDFPGLEIELWALRE
CCCCEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MRNENRVAWSEGMFLRVQHFQQADRWTERLVRTATHGLSPYPWGVAEIGIDRGALAIGQF
CCCCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHH
ALSNLRGVLPDGTPFEAPVDTDLPPPLDLDENTKNAVVYLALPARQPGKADVALNGGAAR
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCC
NSVRLVASPYEAPDANVETDFMAPIDVGRLSLRYLRTGDELAGYELIGLARIIEVRSDRA
CCEEEEECCCCCCCCCCCCCEECCCCHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCE
VILDPDYIVPSLNCTAAARLGELITELLGIVRHRAEAIAERIGDPTIRGTAEVGDYLLLQ
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
MLNRADPMLKHISANATRIHPIVFYETCIQLAGELATFTTDRKRASDFPPYRHDDLKATF
HHHHCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHH
AAVFDDLRASLSSVLEQAAVAIELAERRHGVRIGTINDRSLLRDAGFVLAVRAEMPAEDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHCCEEEEEECCCCHHHH
RRKLPAQIKIGPVERIADLVNVALPGIPVRPLPVLPRQLPYRSGTIYFELDTKNPLWKQL
HHHCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHC
DTSGAIAVHLAGDFPGLEIELWALRE
CCCCEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA