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The map label for this gene is cbbl1

Identifier: 116249062

GI number: 116249062

Start: 428905

End: 430200

Strand: Reverse

Name: cbbl1

Synonym: pRL120396

Alternate gene names: NA

Gene position: 430200-428905 (Counterclockwise)

Preceding gene: 116249081

Following gene: 116249061

Centisome position: 49.45

GC content: 63.58

Gene sequence:

>1296_bases
ATGGCAATCTGCGTGGCGAGAGGAGCAACCGCCAGTTTCATGATGATTACCCTGACCTACCGTATCGAAACGCCCGGCAG
CGTCGAGGCGATGGCGGAAAAGATCGCGAGCGACCAGTCGACGGGAACCTTCGTTCCCGTCCCCGGCGAGACCGAAGAGC
TGAAATCGCGTGTCGCCGCCCGTGTCCTGGCGATCCGTCCGCTCGAAGGCGCCAGTCATCCGACCTGGCCCGAGGTCGCC
CCCGGCACGCTGCTTCATCGCGCCGATGTCGACATCGCCTTTCCGCTGGACGCGATCGGCACGGACCTTTCGGCATTGAT
GACCATTGCGATCGGCGGCGTCTATTCCATCAAGGGCATGACCGGCATCCGCATCGTCGACTTGACGCTGCCCGAAGCCT
TCAAGAGCGCGCATCCGGGACCACAGTTCGGCATCCCTGGAAGCCGCCGCCTCGCCGGCGTCGAAGGTCGCCCCATCATC
GGAACGATCGTCAAGCCGGCGCTTGGTCTCAGGCCCCACGAAACGGCGGAACTCGTCGGCGAGTTGATCTCATCCGGCGT
CGACTTCATCAAGGATGACGAAAAACTGATGAGCCCCGCCTATTCGCCGCTCAAGGACCGCGTTGCGGCGATCATGCCGC
GCATTCTCGATCACGAGCAGAAGACCGGCAAGAAGGTCATGTATGCCTTCGGCATCTCGCATGCCGACCCCGACGAGATG
ATGCGCAACCACGACATCGTCGCCAAGGCCGGCGGCAACTGCGCCGTCGTCAACATCAACTCGATCGGCTTCGGCGGCAT
GAGCTTTCTGCGCAAGCGCTCCAATCTAGTGCTGCACGCGCATCGAAACGGTTGGGACGTGCTGACGCGCGATCCGGGCG
CCGGCATGGATTTCAAGGTCTACCAGCAATTCTGGCGGCTGCTGGGGGTCGATCAGTTTCAGATCAACGGTATCAGGGTC
AAATATTGGGAGCCGGACGACAGTTTCGTCTCGTCCTTCAAGGCCGTCAGCACGCCGCTCTTCGACGCCTCCGATTGCCC
GCTTCCGGTTGCCGGTTCGGGCCAGTGGGGAGGACAGGCGCCTGAGACCTATCACCGGACCGGCCGCACCATCGATCTTC
TCTATCTCTGCGGCGGCGGCATCGTCAGCCACCCCGGCGGCCCGGCGGCCGGCGTTCGGGCCGTGCAGCAGGCATGGCAG
GCAGCCGTCGCAGACATCCCGTTGGAGGTCTATGCCCGGGATCACCCGGAACTCGCCGCCTCGATTGCAAAATTCAGCGG
CGGCAAGGGCGCGTGA

Upstream 100 bases:

>100_bases
TCCGTGTCGAGAACAAAGCTGTCGGCGAAATTTTGCGGATCCGAAGATTCTACTTTTCATAAGTTGGAATACTCATTATA
CCAGATCACGAGTTGACGCC

Downstream 100 bases:

>100_bases
CCGCGATGGATGGACCTCTCGTCAGCTATTACGGGGACGACTTCACCGGCTCCACCGATGTCATGGAGGCCCTGGCGTCG
AACGGTGTCTCTACCGTGCT

Product: putative ribulose bisphosphate carboxylase large chain 1

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MAICVARGATASFMMITLTYRIETPGSVEAMAEKIASDQSTGTFVPVPGETEELKSRVAARVLAIRPLEGASHPTWPEVA
PGTLLHRADVDIAFPLDAIGTDLSALMTIAIGGVYSIKGMTGIRIVDLTLPEAFKSAHPGPQFGIPGSRRLAGVEGRPII
GTIVKPALGLRPHETAELVGELISSGVDFIKDDEKLMSPAYSPLKDRVAAIMPRILDHEQKTGKKVMYAFGISHADPDEM
MRNHDIVAKAGGNCAVVNINSIGFGGMSFLRKRSNLVLHAHRNGWDVLTRDPGAGMDFKVYQQFWRLLGVDQFQINGIRV
KYWEPDDSFVSSFKAVSTPLFDASDCPLPVAGSGQWGGQAPETYHRTGRTIDLLYLCGGGIVSHPGGPAAGVRAVQQAWQ
AAVADIPLEVYARDHPELAASIAKFSGGKGA

Sequences:

>Translated_431_residues
MAICVARGATASFMMITLTYRIETPGSVEAMAEKIASDQSTGTFVPVPGETEELKSRVAARVLAIRPLEGASHPTWPEVA
PGTLLHRADVDIAFPLDAIGTDLSALMTIAIGGVYSIKGMTGIRIVDLTLPEAFKSAHPGPQFGIPGSRRLAGVEGRPII
GTIVKPALGLRPHETAELVGELISSGVDFIKDDEKLMSPAYSPLKDRVAAIMPRILDHEQKTGKKVMYAFGISHADPDEM
MRNHDIVAKAGGNCAVVNINSIGFGGMSFLRKRSNLVLHAHRNGWDVLTRDPGAGMDFKVYQQFWRLLGVDQFQINGIRV
KYWEPDDSFVSSFKAVSTPLFDASDCPLPVAGSGQWGGQAPETYHRTGRTIDLLYLCGGGIVSHPGGPAAGVRAVQQAWQ
AAVADIPLEVYARDHPELAASIAKFSGGKGA
>Mature_430_residues
AICVARGATASFMMITLTYRIETPGSVEAMAEKIASDQSTGTFVPVPGETEELKSRVAARVLAIRPLEGASHPTWPEVAP
GTLLHRADVDIAFPLDAIGTDLSALMTIAIGGVYSIKGMTGIRIVDLTLPEAFKSAHPGPQFGIPGSRRLAGVEGRPIIG
TIVKPALGLRPHETAELVGELISSGVDFIKDDEKLMSPAYSPLKDRVAAIMPRILDHEQKTGKKVMYAFGISHADPDEMM
RNHDIVAKAGGNCAVVNINSIGFGGMSFLRKRSNLVLHAHRNGWDVLTRDPGAGMDFKVYQQFWRLLGVDQFQINGIRVK
YWEPDDSFVSSFKAVSTPLFDASDCPLPVAGSGQWGGQAPETYHRTGRTIDLLYLCGGGIVSHPGGPAAGVRAVQQAWQA
AVADIPLEVYARDHPELAASIAKFSGGKGA

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 46089; Mature: 45958

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAICVARGATASFMMITLTYRIETPGSVEAMAEKIASDQSTGTFVPVPGETEELKSRVAA
CEEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHH
RVLAIRPLEGASHPTWPEVAPGTLLHRADVDIAFPLDAIGTDLSALMTIAIGGVYSIKGM
HHHEEECCCCCCCCCCCCCCCCCEEEECCCEEEECHHHHCCCHHHHHHHHHCCEEEECCC
TGIRIVDLTLPEAFKSAHPGPQFGIPGSRRLAGVEGRPIIGTIVKPALGLRPHETAELVG
CCEEEEEEECCHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHH
ELISSGVDFIKDDEKLMSPAYSPLKDRVAAIMPRILDHEQKTGKKVMYAFGISHADPDEM
HHHHCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCHHHH
MRNHDIVAKAGGNCAVVNINSIGFGGMSFLRKRSNLVLHAHRNGWDVLTRDPGAGMDFKV
HHCCCEEEECCCCEEEEEECCCCCCHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCHHH
YQQFWRLLGVDQFQINGIRVKYWEPDDSFVSSFKAVSTPLFDASDCPLPVAGSGQWGGQA
HHHHHHHHCCCEEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PETYHRTGRTIDLLYLCGGGIVSHPGGPAAGVRAVQQAWQAAVADIPLEVYARDHPELAA
CHHHHHCCCEEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
SIAKFSGGKGA
HHHHCCCCCCC
>Mature Secondary Structure 
AICVARGATASFMMITLTYRIETPGSVEAMAEKIASDQSTGTFVPVPGETEELKSRVAA
EEEEECCCCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHH
RVLAIRPLEGASHPTWPEVAPGTLLHRADVDIAFPLDAIGTDLSALMTIAIGGVYSIKGM
HHHEEECCCCCCCCCCCCCCCCCEEEECCCEEEECHHHHCCCHHHHHHHHHCCEEEECCC
TGIRIVDLTLPEAFKSAHPGPQFGIPGSRRLAGVEGRPIIGTIVKPALGLRPHETAELVG
CCEEEEEEECCHHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCHHHHHHH
ELISSGVDFIKDDEKLMSPAYSPLKDRVAAIMPRILDHEQKTGKKVMYAFGISHADPDEM
HHHHCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCCHHHH
MRNHDIVAKAGGNCAVVNINSIGFGGMSFLRKRSNLVLHAHRNGWDVLTRDPGAGMDFKV
HHCCCEEEECCCCEEEEEECCCCCCHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCHHH
YQQFWRLLGVDQFQINGIRVKYWEPDDSFVSSFKAVSTPLFDASDCPLPVAGSGQWGGQA
HHHHHHHHCCCEEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PETYHRTGRTIDLLYLCGGGIVSHPGGPAAGVRAVQQAWQAAVADIPLEVYARDHPELAA
CHHHHHCCCEEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHH
SIAKFSGGKGA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]