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The map label for this gene is ygbK [C]

Identifier: 116249061

GI number: 116249061

Start: 427562

End: 428899

Strand: Reverse

Name: ygbK [C]

Synonym: pRL120395

Alternate gene names: 116249061

Gene position: 428899-427562 (Counterclockwise)

Preceding gene: 116249062

Following gene: 116249060

Centisome position: 49.3

GC content: 63.53

Gene sequence:

>1338_bases
ATGGATGGACCTCTCGTCAGCTATTACGGGGACGACTTCACCGGCTCCACCGATGTCATGGAGGCCCTGGCGTCGAACGG
TGTCTCTACCGTGCTCTTCCTCGACGTTCCGACACCGGAACTGCTCGCGCGCTTTGGGGATTGCCGCGCAATCGGCATTG
CCGGGACAAGCCGCAGCGAGACCCCCGCATGGATGGGAGAGTACCTCACGCGCGCTTTCGAATGGCTGAATTCGCTCGGC
GCTGACATTTGTCACTACAAGGTCTGCTCGACCTTCGATTCCAGCCCCGAAATCGGCAATATTGGCAAGGCGATCGAAAT
CGGCCGCTCGGTGTTCGGGCAATCCGTCGTGCCCGTCATCGTCGGCGCACCGCAATTGAAACGCTACACGGCATTCGGCA
ATCTCTTTGCCGCTTACCAGGGCCGGATCTTTCGCATCGACCGCCATCCCGTCATGAGCCGCCATCCGGTGACCCCGATG
GACGAGGCGGATCTTGCGGTCCACCTGTCGAAGCAGACCCGGCTTCCCGTCCTGGTCGCCGATCTCGTCGCCATCACCGC
GACGGACGCCGATGCGCGTGTCGACGAACTGGCGTCGGCTTTACAAGGGATCCTGCTCATCGATGTCGACTCCGAGGCGA
CGCAGGAGGCTGCTGGTAGGCAGCTGCTTCGTGTCACCGGCCGTTCCGGAAGTTTTGTCGCCGGCTCCTCGGGTGTCGAA
TATGCCCTGCTCAGCGCATGGCGGCGGAGCGGTTTCATCGGCAGCAGCGGCGCCGAGTTTCCCGATATCGGCCCGGTCGA
CCGCCTCGCCGTCGTGTCGGGCAGCGTATCGCCGACGACCGAGCGCCAGATCCGGACGGCTGTCGAGAACGGCTTCGAGA
GTATAGCGCTCGATCCGCTCACCCTGGTCTCGGAGCATGGCGAAGGCGCGGTAAATGCTGCGGTGGAGGCTGGAACGCAG
CAGCTCAGGCAAGGCAAGAGCGTCATCCTGTATACCGCGCTTGGACCGTCCGCAGACCGCGGCGCCGACATAGACAGGCT
TCCAGGCGCTCGTCACCGGCTCGGGAGCGCGCTCGGCACGATCTTGCGCCGCCTGATCGAGAACGAAAGGCTTTCACGTG
CGGTCGTCGCCGGCGGTGACACATCAAGTCATGCACTCAGGCAGTTGAAGATCGACGCGCTGACGACGCTTCTGCCGCTG
CCCCAGACGCCGGGTTCTCCGCTTTGCCTTGCGCATGGCGACTATCAGCCGACGAACGGCCTGCAGATCGCGCTCAAAGG
CGGCCAGGTCGGGACGGACGGCTATTTCGTTCAGATCCGTGAGGGAAGGAAGCACTGA

Upstream 100 bases:

>100_bases
CAGCCGTCGCAGACATCCCGTTGGAGGTCTATGCCCGGGATCACCCGGAACTCGCCGCCTCGATTGCAAAATTCAGCGGC
GGCAAGGGCGCGTGACCGCG

Downstream 100 bases:

>100_bases
TGGTTTTCCTTCGGTATCGGCCGAAACGTGCGATCGCAGAAAAACGTGACTCTAACAAATTAAGCAGTGATATGGTGATT
GACTCATCATACCAGTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MDGPLVSYYGDDFTGSTDVMEALASNGVSTVLFLDVPTPELLARFGDCRAIGIAGTSRSETPAWMGEYLTRAFEWLNSLG
ADICHYKVCSTFDSSPEIGNIGKAIEIGRSVFGQSVVPVIVGAPQLKRYTAFGNLFAAYQGRIFRIDRHPVMSRHPVTPM
DEADLAVHLSKQTRLPVLVADLVAITATDADARVDELASALQGILLIDVDSEATQEAAGRQLLRVTGRSGSFVAGSSGVE
YALLSAWRRSGFIGSSGAEFPDIGPVDRLAVVSGSVSPTTERQIRTAVENGFESIALDPLTLVSEHGEGAVNAAVEAGTQ
QLRQGKSVILYTALGPSADRGADIDRLPGARHRLGSALGTILRRLIENERLSRAVVAGGDTSSHALRQLKIDALTTLLPL
PQTPGSPLCLAHGDYQPTNGLQIALKGGQVGTDGYFVQIREGRKH

Sequences:

>Translated_445_residues
MDGPLVSYYGDDFTGSTDVMEALASNGVSTVLFLDVPTPELLARFGDCRAIGIAGTSRSETPAWMGEYLTRAFEWLNSLG
ADICHYKVCSTFDSSPEIGNIGKAIEIGRSVFGQSVVPVIVGAPQLKRYTAFGNLFAAYQGRIFRIDRHPVMSRHPVTPM
DEADLAVHLSKQTRLPVLVADLVAITATDADARVDELASALQGILLIDVDSEATQEAAGRQLLRVTGRSGSFVAGSSGVE
YALLSAWRRSGFIGSSGAEFPDIGPVDRLAVVSGSVSPTTERQIRTAVENGFESIALDPLTLVSEHGEGAVNAAVEAGTQ
QLRQGKSVILYTALGPSADRGADIDRLPGARHRLGSALGTILRRLIENERLSRAVVAGGDTSSHALRQLKIDALTTLLPL
PQTPGSPLCLAHGDYQPTNGLQIALKGGQVGTDGYFVQIREGRKH
>Mature_445_residues
MDGPLVSYYGDDFTGSTDVMEALASNGVSTVLFLDVPTPELLARFGDCRAIGIAGTSRSETPAWMGEYLTRAFEWLNSLG
ADICHYKVCSTFDSSPEIGNIGKAIEIGRSVFGQSVVPVIVGAPQLKRYTAFGNLFAAYQGRIFRIDRHPVMSRHPVTPM
DEADLAVHLSKQTRLPVLVADLVAITATDADARVDELASALQGILLIDVDSEATQEAAGRQLLRVTGRSGSFVAGSSGVE
YALLSAWRRSGFIGSSGAEFPDIGPVDRLAVVSGSVSPTTERQIRTAVENGFESIALDPLTLVSEHGEGAVNAAVEAGTQ
QLRQGKSVILYTALGPSADRGADIDRLPGARHRLGSALGTILRRLIENERLSRAVVAGGDTSSHALRQLKIDALTTLLPL
PQTPGSPLCLAHGDYQPTNGLQIALKGGQVGTDGYFVQIREGRKH

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygbK [H]

Homologues:

Organism=Escherichia coli, GI1789093, Length=285, Percent_Identity=30.1754385964912, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010737 [H]

Pfam domain/function: PF07005 DUF1537 [H]

EC number: NA

Molecular weight: Translated: 47263; Mature: 47263

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGPLVSYYGDDFTGSTDVMEALASNGVSTVLFLDVPTPELLARFGDCRAIGIAGTSRSE
CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCCCC
TPAWMGEYLTRAFEWLNSLGADICHYKVCSTFDSSPEIGNIGKAIEIGRSVFGQSVVPVI
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
VGAPQLKRYTAFGNLFAAYQGRIFRIDRHPVMSRHPVTPMDEADLAVHLSKQTRLPVLVA
ECCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHH
DLVAITATDADARVDELASALQGILLIDVDSEATQEAAGRQLLRVTGRSGSFVAGSSGVE
HHHHHEECCCHHHHHHHHHHHCCEEEEECCCHHHHHHHCCEEEEEECCCCCEEECCCCCH
YALLSAWRRSGFIGSSGAEFPDIGPVDRLAVVSGSVSPTTERQIRTAVENGFESIALDPL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHCCCHH
TLVSEHGEGAVNAAVEAGTQQLRQGKSVILYTALGPSADRGADIDRLPGARHRLGSALGT
HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHH
ILRRLIENERLSRAVVAGGDTSSHALRQLKIDALTTLLPLPQTPGSPLCLAHGDYQPTNG
HHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
LQIALKGGQVGTDGYFVQIREGRKH
EEEEEECCEECCCCEEEEECCCCCC
>Mature Secondary Structure
MDGPLVSYYGDDFTGSTDVMEALASNGVSTVLFLDVPTPELLARFGDCRAIGIAGTSRSE
CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHCCCCEEEEECCCCCCC
TPAWMGEYLTRAFEWLNSLGADICHYKVCSTFDSSPEIGNIGKAIEIGRSVFGQSVVPVI
CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
VGAPQLKRYTAFGNLFAAYQGRIFRIDRHPVMSRHPVTPMDEADLAVHLSKQTRLPVLVA
ECCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHH
DLVAITATDADARVDELASALQGILLIDVDSEATQEAAGRQLLRVTGRSGSFVAGSSGVE
HHHHHEECCCHHHHHHHHHHHCCEEEEECCCHHHHHHHCCEEEEEECCCCCEEECCCCCH
YALLSAWRRSGFIGSSGAEFPDIGPVDRLAVVSGSVSPTTERQIRTAVENGFESIALDPL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCHHHHCCCHH
TLVSEHGEGAVNAAVEAGTQQLRQGKSVILYTALGPSADRGADIDRLPGARHRLGSALGT
HHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHH
ILRRLIENERLSRAVVAGGDTSSHALRQLKIDALTTLLPLPQTPGSPLCLAHGDYQPTNG
HHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
LQIALKGGQVGTDGYFVQIREGRKH
EEEEEECCEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]