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The map label for this gene is lrp [C]

Identifier: 116249081

GI number: 116249081

Start: 449625

End: 450089

Strand: Reverse

Name: lrp [C]

Synonym: pRL120415

Alternate gene names: 116249081

Gene position: 450089-449625 (Counterclockwise)

Preceding gene: 116249085

Following gene: 116249062

Centisome position: 51.73

GC content: 59.57

Gene sequence:

>465_bases
ATGCCCGCTCTCGACGCCATCGATCGCAATATCCTGAGGCTACTGCGCCTCGATGCCCGCATGAGCAATGCCAAGCTCGC
CGCCGAGATCGGTCTTTCTCCCTCGGCCTGCCTCAGGCGCATCAAGATCATGGAAAAATCAGGCGTGATCCGCGGCTATA
CGGTGCTGGTCGACACCGGCAATGCGGATGAGATGATCGCCGTGATCATCAACATCACTCTAGAGCGACAAACGGAGGAC
TATCTCGACCGCCTCGAGGCGGCGGTTCGGCGGCATCCCGAGATCCGGGAATGTTTTCTGATGACGGGCGGTTCCGACTA
TCTGCTGCGCGTGGAGGTTGCCAATGCGGGCGAGTTCGAGCGGATCCACAAAGAGATACTGTCGACCTTACCCGGCGTCC
TCAGAATTCATTCCAGCTTCTCGATCCGCAATGTTCTGGCGACGCGCACGAGGGGCAGGCGCTGA

Upstream 100 bases:

>100_bases
TTTATGAAATAATGAGCGAAATTGCCTATCATTCAGTAGCCGATTATTGCTTGATTTGCCCATTATGCGCATAATCGATA
AAAGTTTGGAATGATCCACT

Downstream 100 bases:

>100_bases
ACCGCGATCTAAGCTAATATTAATTGAGCGCCCCTCCGCATGGCAGCCCAGCGTCAGCGAAGAAGGAAATCTACCCCGCC
TGCTATCGCGCCAGCGTCTG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: ORF-1 [H]

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MPALDAIDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTVLVDTGNADEMIAVIINITLERQTED
YLDRLEAAVRRHPEIRECFLMTGGSDYLLRVEVANAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR

Sequences:

>Translated_154_residues
MPALDAIDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTVLVDTGNADEMIAVIINITLERQTED
YLDRLEAAVRRHPEIRECFLMTGGSDYLLRVEVANAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR
>Mature_153_residues
PALDAIDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTVLVDTGNADEMIAVIINITLERQTEDY
LDRLEAAVRRHPEIRECFLMTGGSDYLLRVEVANAGEFERIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR

Specific function: Not known, symbiotically active [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=130, Percent_Identity=41.5384615384615, Blast_Score=110, Evalue=3e-26,
Organism=Escherichia coli, GI87081742, Length=147, Percent_Identity=28.5714285714286, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17372; Mature: 17240

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALDAIDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTVLVDTG
CCCHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECC
NADEMIAVIINITLERQTEDYLDRLEAAVRRHPEIRECFLMTGGSDYLLRVEVANAGEFE
CCHHEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEEECCCCCHH
RIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR
HHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PALDAIDRNILRLLRLDARMSNAKLAAEIGLSPSACLRRIKIMEKSGVIRGYTVLVDTG
CCHHHHHHHHHHHHHHHHHCCCCCEEHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECC
NADEMIAVIINITLERQTEDYLDRLEAAVRRHPEIRECFLMTGGSDYLLRVEVANAGEFE
CCHHEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHEEEEECCCCEEEEEEECCCCCHH
RIHKEILSTLPGVLRIHSSFSIRNVLATRTRGRR
HHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8190622; 9163424 [H]