| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248942
Identifier: 116248942
GI number: 116248942
Start: 286874
End: 287752
Strand: Reverse
Name: 116248942
Synonym: pRL120272
Alternate gene names: NA
Gene position: 287752-286874 (Counterclockwise)
Preceding gene: 116248943
Following gene: 116248941
Centisome position: 33.07
GC content: 55.75
Gene sequence:
>879_bases TTGCCGAGCAACCGCCGGTCTCTGCTTTGGCCGGGGCTTTTGATATCGATTTTGCTTCTTGCAGCCCTCGTCGTTTTTTT CCGTGAAGTCCACCACCTCGAAGAGCCGGTCGAGCCCCTTGAATATCGAACTCTCAACAAGGCTGCCCGATCACCTCGCA TCGCCGCCCGCCAAGATCCGGCGGCTCCTTCTCCCCTCCCGTCGATATCGATATCGCTGCAGCTGATCGAGGTCCCGAAG CTGGAGTTGGCAAGTCAGTTTCTGCGGATCTGGCGCGTCTCGGGGCTGAATATGTGCGGTGCTCTTCGAGAGGCCGGCAT CGATATGAGCGAATGGAAAGCCGCATCGATGCGCAATCGCAGCTATGAATGTTACTTTCAGCGCATCTACGAACGGGACG AGGTGCGTCCCCTCAGCTCGACCTTCGTTAAGGTTCGTGGAGATGAAATGGGCGGTATTCTTGATATCCGCGCAAAGATC ATTGGGCCGACGACCGACGCCCAGGGACGTCTCGCTCCGGCTGTCCTGCGCATTTTCGAGATCATCGTGAAGCAGGCGTG CTGGCGTGATTTCGAGGATACTCTTGCCTCGATCCAAAACCTTCGAAATGTCGAATACGAACGATTCGGCTCGTATCTCA GCTTTACGCGCGAAGCAAGCAGCGCAAATATCTTCAATTTTGTTCTTGGTCTTAAGGCGACTTCAAGTTCGCAGGTGAAG ACCAAGACGTATTTTTCGACTGAGCGCTGGCTCCAAATGCCCGCAGTGCTCCCGCGAACTTCATCCACAGTGAGCGCTCG GAAACGTCCATATGAGCCAGCGCTCAATGACGGTGCAAGCACTCGTCACGATCCGGGATCGAGCCGGAACTGTGGCTGA
Upstream 100 bases:
>100_bases CGCAGCCGCTCCTATTTTCTTGTAAGGTCGCGCCGTGGATAAAGTCTTATCACCCGTCGATCCTCCTCGCGACAGTACAT TTTGGCATCGGAACTTTCCA
Downstream 100 bases:
>100_bases ACATCGACGATAACCGCCGATGCCGCCGAACGCATGGACAGGCCCGGAAAAGAACATATCTTCAAGGGGCCTTCCTTTCT GGAAGCCTCGAACCAAACAG
Product: putative exopolysaccharide synthesis related protein
Products: NA
Alternate protein names: Exopolysaccharide Synthesis Protein; Exopolysaccharide Synthesis Related Protein
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MPSNRRSLLWPGLLISILLLAALVVFFREVHHLEEPVEPLEYRTLNKAARSPRIAARQDPAAPSPLPSISISLQLIEVPK LELASQFLRIWRVSGLNMCGALREAGIDMSEWKAASMRNRSYECYFQRIYERDEVRPLSSTFVKVRGDEMGGILDIRAKI IGPTTDAQGRLAPAVLRIFEIIVKQACWRDFEDTLASIQNLRNVEYERFGSYLSFTREASSANIFNFVLGLKATSSSQVK TKTYFSTERWLQMPAVLPRTSSTVSARKRPYEPALNDGASTRHDPGSSRNCG
Sequences:
>Translated_292_residues MPSNRRSLLWPGLLISILLLAALVVFFREVHHLEEPVEPLEYRTLNKAARSPRIAARQDPAAPSPLPSISISLQLIEVPK LELASQFLRIWRVSGLNMCGALREAGIDMSEWKAASMRNRSYECYFQRIYERDEVRPLSSTFVKVRGDEMGGILDIRAKI IGPTTDAQGRLAPAVLRIFEIIVKQACWRDFEDTLASIQNLRNVEYERFGSYLSFTREASSANIFNFVLGLKATSSSQVK TKTYFSTERWLQMPAVLPRTSSTVSARKRPYEPALNDGASTRHDPGSSRNCG >Mature_291_residues PSNRRSLLWPGLLISILLLAALVVFFREVHHLEEPVEPLEYRTLNKAARSPRIAARQDPAAPSPLPSISISLQLIEVPKL ELASQFLRIWRVSGLNMCGALREAGIDMSEWKAASMRNRSYECYFQRIYERDEVRPLSSTFVKVRGDEMGGILDIRAKII GPTTDAQGRLAPAVLRIFEIIVKQACWRDFEDTLASIQNLRNVEYERFGSYLSFTREASSANIFNFVLGLKATSSSQVKT KTYFSTERWLQMPAVLPRTSSTVSARKRPYEPALNDGASTRHDPGSSRNCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32923; Mature: 32792
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNRRSLLWPGLLISILLLAALVVFFREVHHLEEPVEPLEYRTLNKAARSPRIAARQDP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC AAPSPLPSISISLQLIEVPKLELASQFLRIWRVSGLNMCGALREAGIDMSEWKAASMRNR CCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCC SYECYFQRIYERDEVRPLSSTFVKVRGDEMGGILDIRAKIIGPTTDAQGRLAPAVLRIFE CHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCEEEEEHEEECCCCCCCCCHHHHHHHHHH IIVKQACWRDFEDTLASIQNLRNVEYERFGSYLSFTREASSANIFNFVLGLKATSSSQVK HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC TKTYFSTERWLQMPAVLPRTSSTVSARKRPYEPALNDGASTRHDPGSSRNCG HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSNRRSLLWPGLLISILLLAALVVFFREVHHLEEPVEPLEYRTLNKAARSPRIAARQDP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCC AAPSPLPSISISLQLIEVPKLELASQFLRIWRVSGLNMCGALREAGIDMSEWKAASMRNR CCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCC SYECYFQRIYERDEVRPLSSTFVKVRGDEMGGILDIRAKIIGPTTDAQGRLAPAVLRIFE CHHHHHHHHHHHHCCCCHHHHEEEEECCCCCCEEEEEHEEECCCCCCCCCHHHHHHHHHH IIVKQACWRDFEDTLASIQNLRNVEYERFGSYLSFTREASSANIFNFVLGLKATSSSQVK HHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCC TKTYFSTERWLQMPAVLPRTSSTVSARKRPYEPALNDGASTRHDPGSSRNCG HHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA