Click here to switch to the map view.

The map label for this gene is 116248928

Identifier: 116248928

GI number: 116248928

Start: 270107

End: 271066

Strand: Reverse

Name: 116248928

Synonym: pRL120258

Alternate gene names: NA

Gene position: 271066-270107 (Counterclockwise)

Preceding gene: 116248929

Following gene: 116248926

Centisome position: 31.16

GC content: 57.5

Gene sequence:

>960_bases
ATGCGAAAACGGATACATGTCAGCCAATTGCGGGTAGGAATGTATGTCGAGGACGTCGAGATTGAGGGAGAAGACAGGAC
ACGCCGGTTCAAGCCGTTCCTGATCTCGGCCGCCGGTCAGGTCGAGAGTTTAATGGCAAGCCGCCTGATGACTGTCGTTA
TCGACGTCGGAAAGGGCGCGGATGTCGACCCGGGCGGGGCACAGGACATCGACCGGGCTGCGTTCGACGCCCAACTTCGT
GCCGTGTTTTCGGCAAAGGATATCAAGCAGGCGAGGGAATGCGTCGAGGATACAAGACCGCAGATCCGTCAAATGCTTGC
CCACGCCAGGATCAAGGCCTCTTTCGCCAGTGATGCGGCAAGCGCAGCTGTGGAGCGGATCATGTCGGCAGCCTTCGACA
ACGCCGGCGCGCTGATCGCAGTCGCAAAGCTGAAAGAAAAGGATGAGCTGACGTTCCTCCATTCGCTTGCGGTTAGCGCG
TTGATGATCACCCTAGGGCGCAGCCTCGGTCATGGAGAAGAGGATGTGCGGGTATTGGGACTGGGTGGACTGGTTCACGA
TCTTGGAAAAATGGCGCTCCCGGACGAAATCTTGACGAAACCCGGTAAGCTGACGGCCGAGGAAATGGATCTTGTCCGCG
GGCATCCTCAGCGGGGATATGAGCTGGTTTCTCATGTCGCCCATGTCCCGAAGCCGGTGCTCGACATTTGTCGCTACCAC
CACGAAAAATTCGATGGCTCGGGCTATCCTGGCCGGCTCGCCGGAAAGAAGATCCCTTACGTCGCCCGGCTTGCGGCGAT
TTGCGACGTTTACGAAGCGCTGACCACGATCAGGCCGTATAAGCGCGCTTTCTCGCAAGCAGAGGCGATCAACATGATGA
TGAATTCGCCGGGACATTTCGATAGCCAGCTTCTTTCCGCATTCGTGTCGAAAATGGTGATCAGCGGCACGCTCCACTAA

Upstream 100 bases:

>100_bases
TGCCGGAGCCCTATAGCCTGAGCGAGGTTTTCGCGCTCGGGCCCGCCCCGGATAACTGAGACCACGCTTGAGTACCAAGA
TTATTTTGAACGGATCAGAG

Downstream 100 bases:

>100_bases
AGTGGTCGTTGCCGTACGACGGTCGCACCGGGGGAACATGGTCAGAAGTGATATTCTGCTGGCAGGGGCGATCTTGCTTT
CCGCGATCATCGTTGGTGGC

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRKRIHVSQLRVGMYVEDVEIEGEDRTRRFKPFLISAAGQVESLMASRLMTVVIDVGKGADVDPGGAQDIDRAAFDAQLR
AVFSAKDIKQARECVEDTRPQIRQMLAHARIKASFASDAASAAVERIMSAAFDNAGALIAVAKLKEKDELTFLHSLAVSA
LMITLGRSLGHGEEDVRVLGLGGLVHDLGKMALPDEILTKPGKLTAEEMDLVRGHPQRGYELVSHVAHVPKPVLDICRYH
HEKFDGSGYPGRLAGKKIPYVARLAAICDVYEALTTIRPYKRAFSQAEAINMMMNSPGHFDSQLLSAFVSKMVISGTLH

Sequences:

>Translated_319_residues
MRKRIHVSQLRVGMYVEDVEIEGEDRTRRFKPFLISAAGQVESLMASRLMTVVIDVGKGADVDPGGAQDIDRAAFDAQLR
AVFSAKDIKQARECVEDTRPQIRQMLAHARIKASFASDAASAAVERIMSAAFDNAGALIAVAKLKEKDELTFLHSLAVSA
LMITLGRSLGHGEEDVRVLGLGGLVHDLGKMALPDEILTKPGKLTAEEMDLVRGHPQRGYELVSHVAHVPKPVLDICRYH
HEKFDGSGYPGRLAGKKIPYVARLAAICDVYEALTTIRPYKRAFSQAEAINMMMNSPGHFDSQLLSAFVSKMVISGTLH
>Mature_319_residues
MRKRIHVSQLRVGMYVEDVEIEGEDRTRRFKPFLISAAGQVESLMASRLMTVVIDVGKGADVDPGGAQDIDRAAFDAQLR
AVFSAKDIKQARECVEDTRPQIRQMLAHARIKASFASDAASAAVERIMSAAFDNAGALIAVAKLKEKDELTFLHSLAVSA
LMITLGRSLGHGEEDVRVLGLGGLVHDLGKMALPDEILTKPGKLTAEEMDLVRGHPQRGYELVSHVAHVPKPVLDICRYH
HEKFDGSGYPGRLAGKKIPYVARLAAICDVYEALTTIRPYKRAFSQAEAINMMMNSPGHFDSQLLSAFVSKMVISGTLH

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34902; Mature: 34902

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRIHVSQLRVGMYVEDVEIEGEDRTRRFKPFLISAAGQVESLMASRLMTVVIDVGKGA
CCCCHHHHHHHHCEEEEEEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DVDPGGAQDIDRAAFDAQLRAVFSAKDIKQARECVEDTRPQIRQMLAHARIKASFASDAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SAAVERIMSAAFDNAGALIAVAKLKEKDELTFLHSLAVSALMITLGRSLGHGEEDVRVLG
HHHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LGGLVHDLGKMALPDEILTKPGKLTAEEMDLVRGHPQRGYELVSHVAHVPKPVLDICRYH
CHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
HEKFDGSGYPGRLAGKKIPYVARLAAICDVYEALTTIRPYKRAFSQAEAINMMMNSPGHF
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DSQLLSAFVSKMVISGTLH
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRKRIHVSQLRVGMYVEDVEIEGEDRTRRFKPFLISAAGQVESLMASRLMTVVIDVGKGA
CCCCHHHHHHHHCEEEEEEEECCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
DVDPGGAQDIDRAAFDAQLRAVFSAKDIKQARECVEDTRPQIRQMLAHARIKASFASDAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SAAVERIMSAAFDNAGALIAVAKLKEKDELTFLHSLAVSALMITLGRSLGHGEEDVRVLG
HHHHHHHHHHHHCCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
LGGLVHDLGKMALPDEILTKPGKLTAEEMDLVRGHPQRGYELVSHVAHVPKPVLDICRYH
CHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
HEKFDGSGYPGRLAGKKIPYVARLAAICDVYEALTTIRPYKRAFSQAEAINMMMNSPGHF
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DSQLLSAFVSKMVISGTLH
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]