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The map label for this gene is yjhH [C]

Identifier: 116248904

GI number: 116248904

Start: 244242

End: 244940

Strand: Reverse

Name: yjhH [C]

Synonym: pRL120234

Alternate gene names: 116248904

Gene position: 244940-244242 (Counterclockwise)

Preceding gene: 116248905

Following gene: 116248903

Centisome position: 28.15

GC content: 61.66

Gene sequence:

>699_bases
TTGATCGCCCCGACGGAACTTCGCGAGATCATTCGCAACGGCCTGCTGTCCTTTCCCGTCACCCCTTTCGATGCCGAGGA
CCGGTTTGCCCCCAAGCCGTTTTCAGCGCATCTGGAATGGCTGTCATCCTACCCGGTTGCCGGCCTGATCGTTGCCGGCG
GCACCGGTGAGCTGTTCTCGCTGACACCGGGTGAGGTGGTTGAGGTGGTAAAGGCCGCCCGCGCCGTGTCCGGCGATGCG
CCTGTTATTGCCGGATGCGGCTATGGCACGCGGATTGCCTGCGACATGGCGCGCGAGATCGAGGCGGCCGGCGGCGACGG
CATTCTTCTGCTGCCGCATTACCTGACCGAGGCGCCGGCAGATGGCATTGCCGCGCGTGTACGGGCCGTTTGCAAGGCCA
CCAATATGGGCGTCATCGTTTATAATCGTGGTCAGGCGCGGGTTTCGGCCGAGCAGCTTGCTCAGCTTGCCGACGAATGC
CCAAATCTGATCGGCTTCAAGGATGGAACCGGTGACATCGATACGGTGCGCCGTGTCACGATCGCGCTCGGAGACCGCCT
TTCCTATATCGGCGGCATGCCGACACACGAACTGTTTGCTCAAGCCTATCGCGGAGCCGGCATGCCGACCTATTCCTCGG
CGGTCTTCAATTTCGTGCCTGAAACGGCATTGAAATTCCACAAGATTCCTCGCCGGTGA

Upstream 100 bases:

>100_bases
CCATGTCGATCCGCAGATTTCTGCGCCCCGTTGCCTACCAGAATTTCCCTGCCGGCCTGTTGCCCCAAGACCTGCGCAAC
TGACATCGAGGAGTACCAAA

Downstream 100 bases:

>100_bases
CGACGCGGCCTGTGAGCAGATGCTGCGCGATTTCTATTATCCCTTTGCCCGCATCCGCGATCGCAAGGCCGGTTATGCGG
TATCCGCGGTCAAGGCAGGC

Product: 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MIAPTELREIIRNGLLSFPVTPFDAEDRFAPKPFSAHLEWLSSYPVAGLIVAGGTGELFSLTPGEVVEVVKAARAVSGDA
PVIAGCGYGTRIACDMAREIEAAGGDGILLLPHYLTEAPADGIAARVRAVCKATNMGVIVYNRGQARVSAEQLAQLADEC
PNLIGFKDGTGDIDTVRRVTIALGDRLSYIGGMPTHELFAQAYRGAGMPTYSSAVFNFVPETALKFHKIPRR

Sequences:

>Translated_232_residues
MIAPTELREIIRNGLLSFPVTPFDAEDRFAPKPFSAHLEWLSSYPVAGLIVAGGTGELFSLTPGEVVEVVKAARAVSGDA
PVIAGCGYGTRIACDMAREIEAAGGDGILLLPHYLTEAPADGIAARVRAVCKATNMGVIVYNRGQARVSAEQLAQLADEC
PNLIGFKDGTGDIDTVRRVTIALGDRLSYIGGMPTHELFAQAYRGAGMPTYSSAVFNFVPETALKFHKIPRR
>Mature_232_residues
MIAPTELREIIRNGLLSFPVTPFDAEDRFAPKPFSAHLEWLSSYPVAGLIVAGGTGELFSLTPGEVVEVVKAARAVSGDA
PVIAGCGYGTRIACDMAREIEAAGGDGILLLPHYLTEAPADGIAARVRAVCKATNMGVIVYNRGQARVSAEQLAQLADEC
PNLIGFKDGTGDIDTVRRVTIALGDRLSYIGGMPTHELFAQAYRGAGMPTYSSAVFNFVPETALKFHKIPRR

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 24707; Mature: 24707

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPTELREIIRNGLLSFPVTPFDAEDRFAPKPFSAHLEWLSSYPVAGLIVAGGTGELFS
CCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEE
LTPGEVVEVVKAARAVSGDAPVIAGCGYGTRIACDMAREIEAAGGDGILLLPHYLTEAPA
CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHCCC
DGIAARVRAVCKATNMGVIVYNRGQARVSAEQLAQLADECPNLIGFKDGTGDIDTVRRVT
CHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
IALGDRLSYIGGMPTHELFAQAYRGAGMPTYSSAVFNFVPETALKFHKIPRR
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIAPTELREIIRNGLLSFPVTPFDAEDRFAPKPFSAHLEWLSSYPVAGLIVAGGTGELFS
CCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCEEE
LTPGEVVEVVKAARAVSGDAPVIAGCGYGTRIACDMAREIEAAGGDGILLLPHYLTEAPA
CCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHCCC
DGIAARVRAVCKATNMGVIVYNRGQARVSAEQLAQLADECPNLIGFKDGTGDIDTVRRVT
CHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
IALGDRLSYIGGMPTHELFAQAYRGAGMPTYSSAVFNFVPETALKFHKIPRR
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA