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The map label for this gene is 116248903

Identifier: 116248903

GI number: 116248903

Start: 244037

End: 244222

Strand: Reverse

Name: 116248903

Synonym: pRL120233

Alternate gene names: NA

Gene position: 244222-244037 (Counterclockwise)

Preceding gene: 116248904

Following gene: 116248902

Centisome position: 28.07

GC content: 60.75

Gene sequence:

>186_bases
ATGCTGCGCGATTTCTATTATCCCTTTGCCCGCATCCGCGATCGCAAGGCCGGTTATGCGGTATCCGCGGTCAAGGCAGG
CGTGCGTTTGCGCGGCTTTGATGCCGGTCCGGTGCGGGCGCCGCTGACGGATCTTACCGACGAGGAAGTCGAGATGATGC
GCGAACTGATTGCTGCGGCCAAGTAA

Upstream 100 bases:

>100_bases
GGCATGCCGACCTATTCCTCGGCGGTCTTCAATTTCGTGCCTGAAACGGCATTGAAATTCCACAAGATTCCTCGCCGGTG
ACGACGCGGCCTGTGAGCAG

Downstream 100 bases:

>100_bases
AATTTCGCGCCCCAGACAAGGTTGAAGGCTCTGCACTTGGAGCGTCAGAGTTGATGGTTGTCGCAAACTAGTATATTAGT
GCACTTGTGCTTTATCAAGC

Product: putative 5-dehydro-4-deoxyglucarate dehydratase

Products: NA

Alternate protein names: 5-keto-4-deoxy-glucarate dehydratase; KDGDH [H]

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MLRDFYYPFARIRDRKAGYAVSAVKAGVRLRGFDAGPVRAPLTDLTDEEVEMMRELIAAAK

Sequences:

>Translated_61_residues
MLRDFYYPFARIRDRKAGYAVSAVKAGVRLRGFDAGPVRAPLTDLTDEEVEMMRELIAAAK
>Mature_61_residues
MLRDFYYPFARIRDRKAGYAVSAVKAGVRLRGFDAGPVRAPLTDLTDEEVEMMRELIAAAK

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR017655
- InterPro:   IPR002220 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.41 [H]

Molecular weight: Translated: 6876; Mature: 6876

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDFYYPFARIRDRKAGYAVSAVKAGVRLRGFDAGPVRAPLTDLTDEEVEMMRELIAAA
CCCCHHCHHHHHHCCCCCHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MLRDFYYPFARIRDRKAGYAVSAVKAGVRLRGFDAGPVRAPLTDLTDEEVEMMRELIAAA
CCCCHHCHHHHHHCCCCCHHHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA