| Definition | Rhizobium leguminosarum bv. viciae 3841 plasmid pRL12, complete sequence. |
|---|---|
| Accession | NC_008378 |
| Length | 870,021 |
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The map label for this gene is 116248697
Identifier: 116248697
GI number: 116248697
Start: 20139
End: 20330
Strand: Reverse
Name: 116248697
Synonym: pRL120021
Alternate gene names: NA
Gene position: 20330-20139 (Counterclockwise)
Preceding gene: 116248699
Following gene: 116248696
Centisome position: 2.34
GC content: 34.9
Gene sequence:
>192_bases TTGCAAAAGGCGCTTGTTTCAGCACCCAAAATTCGAAAATTTGCAGTGAAGAAGCCAGGTGCCACGCTTTTCATTTTGTT GGGTAAACTTTCATTTGTTTACGAAAGTAAAGAAAAAATGCGTCACAAGCAATACAAATGCTGCAGAAAAACACTGATGA TGTCAATCAATTTTATGATTTTTTATCAATGA
Upstream 100 bases:
>100_bases TAAGCCGGCGTGATCCGTCATTTTTGGTGCAGCCCCGCCCTCCCTTTCGAAAATCGAAATATTCCCTTCATTTTCGACTT GTGCAGTCTGCGCCGCGTGG
Downstream 100 bases:
>100_bases TTTAACGCAACACGCGCGGTGAATGCCGGCCTCCCATCTTTTCCCGATCGCAGTTCTTCATTGACAGATGGGGGCTTCAG GGAACCTACTTTGCCTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MQKALVSAPKIRKFAVKKPGATLFILLGKLSFVYESKEKMRHKQYKCCRKTLMMSINFMIFYQ
Sequences:
>Translated_63_residues MQKALVSAPKIRKFAVKKPGATLFILLGKLSFVYESKEKMRHKQYKCCRKTLMMSINFMIFYQ >Mature_63_residues MQKALVSAPKIRKFAVKKPGATLFILLGKLSFVYESKEKMRHKQYKCCRKTLMMSINFMIFYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7450; Mature: 7450
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 11.1 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 7.9 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKALVSAPKIRKFAVKKPGATLFILLGKLSFVYESKEKMRHKQYKCCRKTLMMSINFMI CCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE FYQ EEC >Mature Secondary Structure MQKALVSAPKIRKFAVKKPGATLFILLGKLSFVYESKEKMRHKQYKCCRKTLMMSINFMI CCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE FYQ EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA