Click here to switch to the map view.

The map label for this gene is 116248693

Identifier: 116248693

GI number: 116248693

Start: 16069

End: 16914

Strand: Direct

Name: 116248693

Synonym: pRL120017

Alternate gene names: NA

Gene position: 16069-16914 (Clockwise)

Preceding gene: 116248692

Following gene: 116248698

Centisome position: 1.85

GC content: 58.39

Gene sequence:

>846_bases
ATGAGCTATGTAGACTTGGCGCCATCAGCTCGTGAATTACGGGATGTACGCTACCTGTTCACCGACATCGACGATACGCT
GACCACCGAAGGCAAGTTACTGCCGCAAACCTACGAAGCTCTCTGGGATCTCAGCCGGGTGGGCATTGCAGTCGTGCCGG
TTACGGGCGGCTCCGCCGGTTGGTGCGAACATATCGTTCGTGCCTGGCCGGTGGCAGCGGTCATCGGCGAAAGTGGCGCA
TATTGTGTCACCCGTCAGAACGGCGCAGTCGTCTTCGACTATTGGGAGGACGCCACCCTGCAGGCTGAGCGCCAGCGCCA
GCATCTCCAGGCAATTAAAGAGCTGGTCTCTCAGGGGAGCAAGACGTTCAGAATTGCCCACGATCAGGTCTTCCGGCTGG
CGGACGTCGCGATTGATATCCAGGGTCACGACCCGCGTGAGGTTGAGGACCTCGCGTCCAGTATAAGGGCCATTGGCGGA
ACGGTTGCGATCAGCTCCATTCACATCAACACGTGGATCGGCGATTACAACAAGCGCTCGATGAGCGAACGCGTTCTAAC
CGAGATGTTTGGTGTGGATCCCGATGAAACGGCCGCTGTGACCGCCTTCGTCGGTGACTCTCGAAATGATGCACCGATGT
TTGGCTTTATCCGCAACTCCTTCGGGGTCAACAACATCATCCCGGTTCTTTCACAACTGCAATACGCGCCAAAATGGGTC
TCCTCGCAGCCCGCCGGGCTTGGCTTTGCCGATATTGCCCAAACGATCTTGGACGCGGCTGGCGCGGGTTCTGAGACGTC
TCGTCAGCTTTTGACCGAGCCGGCGGTCATGCCCGCCAGGAAGTAG

Upstream 100 bases:

>100_bases
TCACCCGTTTCTACACCGATCGGCTGCCTGGCGACGCGGCCGCCACCAATGCTCTCGCCGAGAGCGGCTTGGATGTGGTC
ACATGCAGCGAGGATATGAC

Downstream 100 bases:

>100_bases
CGTTGAGCAACCAGGTAAAGGACCAGAAGGGGGAGGGAACCGAGCACGCTCATCGCCATCATTTCGTTCCATTCGAAAGC
GTGCTGGCCCATCAGAAGCT

Product: putative hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase Subfamily IIB; Hydrolase; Had-Superfamily Hydrolase Subfamily IIb; HAD-Superfamily Hydrolase; Hydrolase Protein; IIB Family HAD Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Of Had Superfamily Protein; Archae-Like Hydrolase Family Protein

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MSYVDLAPSARELRDVRYLFTDIDDTLTTEGKLLPQTYEALWDLSRVGIAVVPVTGGSAGWCEHIVRAWPVAAVIGESGA
YCVTRQNGAVVFDYWEDATLQAERQRQHLQAIKELVSQGSKTFRIAHDQVFRLADVAIDIQGHDPREVEDLASSIRAIGG
TVAISSIHINTWIGDYNKRSMSERVLTEMFGVDPDETAAVTAFVGDSRNDAPMFGFIRNSFGVNNIIPVLSQLQYAPKWV
SSQPAGLGFADIAQTILDAAGAGSETSRQLLTEPAVMPARK

Sequences:

>Translated_281_residues
MSYVDLAPSARELRDVRYLFTDIDDTLTTEGKLLPQTYEALWDLSRVGIAVVPVTGGSAGWCEHIVRAWPVAAVIGESGA
YCVTRQNGAVVFDYWEDATLQAERQRQHLQAIKELVSQGSKTFRIAHDQVFRLADVAIDIQGHDPREVEDLASSIRAIGG
TVAISSIHINTWIGDYNKRSMSERVLTEMFGVDPDETAAVTAFVGDSRNDAPMFGFIRNSFGVNNIIPVLSQLQYAPKWV
SSQPAGLGFADIAQTILDAAGAGSETSRQLLTEPAVMPARK
>Mature_280_residues
SYVDLAPSARELRDVRYLFTDIDDTLTTEGKLLPQTYEALWDLSRVGIAVVPVTGGSAGWCEHIVRAWPVAAVIGESGAY
CVTRQNGAVVFDYWEDATLQAERQRQHLQAIKELVSQGSKTFRIAHDQVFRLADVAIDIQGHDPREVEDLASSIRAIGGT
VAISSIHINTWIGDYNKRSMSERVLTEMFGVDPDETAAVTAFVGDSRNDAPMFGFIRNSFGVNNIIPVLSQLQYAPKWVS
SQPAGLGFADIAQTILDAAGAGSETSRQLLTEPAVMPARK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30699; Mature: 30568

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVDLAPSARELRDVRYLFTDIDDTLTTEGKLLPQTYEALWDLSRVGIAVVPVTGGSAG
CCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHH
WCEHIVRAWPVAAVIGESGAYCVTRQNGAVVFDYWEDATLQAERQRQHLQAIKELVSQGS
HHHHHHHHHHHHHEECCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
KTFRIAHDQVFRLADVAIDIQGHDPREVEDLASSIRAIGGTVAISSIHINTWIGDYNKRS
CEEEEHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCHHH
MSERVLTEMFGVDPDETAAVTAFVGDSRNDAPMFGFIRNSFGVNNIIPVLSQLQYAPKWV
HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHC
SSQPAGLGFADIAQTILDAAGAGSETSRQLLTEPAVMPARK
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SYVDLAPSARELRDVRYLFTDIDDTLTTEGKLLPQTYEALWDLSRVGIAVVPVTGGSAG
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCHH
WCEHIVRAWPVAAVIGESGAYCVTRQNGAVVFDYWEDATLQAERQRQHLQAIKELVSQGS
HHHHHHHHHHHHHEECCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCC
KTFRIAHDQVFRLADVAIDIQGHDPREVEDLASSIRAIGGTVAISSIHINTWIGDYNKRS
CEEEEHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCHHH
MSERVLTEMFGVDPDETAAVTAFVGDSRNDAPMFGFIRNSFGVNNIIPVLSQLQYAPKWV
HHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHC
SSQPAGLGFADIAQTILDAAGAGSETSRQLLTEPAVMPARK
CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA