Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353252

Identifier: 115353252

GI number: 115353252

Start: 3541090

End: 3541407

Strand: Direct

Name: 115353252

Synonym: Bamb_3201

Alternate gene names: NA

Gene position: 3541090-3541407 (Clockwise)

Preceding gene: 115353250

Following gene: 115353254

Centisome position: 99.57

GC content: 64.47

Gene sequence:

>318_bases
ATGAAAACCATGAAGCTTGCGGGCTGCACGTTACTGGTGATCGGCTCGACTATCGTCGCCCAGGCCCAGGCCCACGCCGC
GTCGACATTGACGCGTGCGGAAGTTCGCCAGGAACTCGTTGAATTGCAGGCCGCCGGCTACCGGACGAGTCTCGCCAGCA
GTCCCGACTTTCCGCAAAACATGCAGGCGATCATGCAGCGTGCCGCACAGGCGCGCGGCGACGCGGCCGGCTACGGCAGC
GACGGCCATGCGAACGTGGAATCGGGAAAACCGGCGCTGCCGCACGTGGTCGATCGCGACACGTACGCGCATCATTGA

Upstream 100 bases:

>100_bases
CGCGCGGGGTGTTTCGTTTGCCATCCGAAGCCTAGACTCGCTGCATCGATTCCGCCCGTGCCGACGACGGCACGGCTCCG
GAGACTCACGGAGCAACACG

Downstream 100 bases:

>100_bases
AGCGGGTGAACCGGGCCGCTCGCGTGGACACGCGACCAGCCGGGCCGCAGCCGGCTACCCGCCGCGCGACGCGCAGCGGG
TTGCTGCCATCAAACGCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MKTMKLAGCTLLVIGSTIVAQAQAHAASTLTRAEVRQELVELQAAGYRTSLASSPDFPQNMQAIMQRAAQARGDAAGYGS
DGHANVESGKPALPHVVDRDTYAHH

Sequences:

>Translated_105_residues
MKTMKLAGCTLLVIGSTIVAQAQAHAASTLTRAEVRQELVELQAAGYRTSLASSPDFPQNMQAIMQRAAQARGDAAGYGS
DGHANVESGKPALPHVVDRDTYAHH
>Mature_105_residues
MKTMKLAGCTLLVIGSTIVAQAQAHAASTLTRAEVRQELVELQAAGYRTSLASSPDFPQNMQAIMQRAAQARGDAAGYGS
DGHANVESGKPALPHVVDRDTYAHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11087; Mature: 11087

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTMKLAGCTLLVIGSTIVAQAQAHAASTLTRAEVRQELVELQAAGYRTSLASSPDFPQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
MQAIMQRAAQARGDAAGYGSDGHANVESGKPALPHVVDRDTYAHH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTMKLAGCTLLVIGSTIVAQAQAHAASTLTRAEVRQELVELQAAGYRTSLASSPDFPQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
MQAIMQRAAQARGDAAGYGSDGHANVESGKPALPHVVDRDTYAHH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA