| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115353254
Identifier: 115353254
GI number: 115353254
Start: 3543125
End: 3543337
Strand: Direct
Name: 115353254
Synonym: Bamb_3203
Alternate gene names: NA
Gene position: 3543125-3543337 (Clockwise)
Preceding gene: 115353252
Following gene: 115353257
Centisome position: 99.62
GC content: 72.77
Gene sequence:
>213_bases GTGACGGACGCGCGCAGAACGCCGCGCGCGGCCGGCTGGATTATTGGTCGCTTCGTTGGTAGCGGGCACTTTAACATCTC GCCGAAACACGCGCTTGAGGTGGCTCCGGGCGGTGCGCGCCCGCCGCAGCGGGCCGCCGGGCGGGCCGATGGCGACGATC GCAGCGTGCGCATGCGACGGCCGTCGGCACCGCCGGACGCAACGGTCGCGTGA
Upstream 100 bases:
>100_bases AGATGCTGCCGCGTCGGGCCCGAGCTCAGCGCTTCGAGACGATTCAGCAGCAGTTCGGACTGGCGGTGAGTCATGGTGTT CGACATGGAGGCGCAAGGGC
Downstream 100 bases:
>100_bases AATTCGTCGGATGGAACGCGAACGGCTCGAATGGCTCGGACGGTGCGCGCAGCGGCGCCGACAGGTGCAACCCGTGCCGC CGAATGCGCCGGGCGATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MTDARRTPRAAGWIIGRFVGSGHFNISPKHALEVAPGGARPPQRAAGRADGDDRSVRMRRPSAPPDATVA
Sequences:
>Translated_70_residues MTDARRTPRAAGWIIGRFVGSGHFNISPKHALEVAPGGARPPQRAAGRADGDDRSVRMRRPSAPPDATVA >Mature_69_residues TDARRTPRAAGWIIGRFVGSGHFNISPKHALEVAPGGARPPQRAAGRADGDDRSVRMRRPSAPPDATVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7415; Mature: 7284
Theoretical pI: Translated: 12.26; Mature: 12.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDARRTPRAAGWIIGRFVGSGHFNISPKHALEVAPGGARPPQRAAGRADGDDRSVRMRR CCCCCCCCCCCCEEEEHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEC PSAPPDATVA CCCCCCCCCC >Mature Secondary Structure TDARRTPRAAGWIIGRFVGSGHFNISPKHALEVAPGGARPPQRAAGRADGDDRSVRMRR CCCCCCCCCCCEEEEHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEC PSAPPDATVA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA