| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ampG [C]
Identifier: 115353207
GI number: 115353207
Start: 3488539
End: 3489960
Strand: Direct
Name: ampG [C]
Synonym: Bamb_3156
Alternate gene names: 115353207
Gene position: 3488539-3489960 (Clockwise)
Preceding gene: 115353206
Following gene: 115353208
Centisome position: 98.09
GC content: 68.28
Gene sequence:
>1422_bases ATGTCGAAAACGCCACACGAGGCGCCCGCGCTCACCGCTCACGAGGATCACCCCGGCTGGCGAGCCTATCTGAACACGCA CATGCTGATCTGCGTGTTCCTCGGGTTCACGTCCGGTCTGCCCCTGTTCACGCTCGTCTACCTCGTGCAGGCATGGCTGC GCTCCGAAGGCGTGAACCTGAAGGAAATCGGCCTGTTCGCGCTGATCCAGTTCCCGTATACGTGGAAGTTCCTGTGGGCG CCGCTGATGGACCGCTACATCCCGCGCCTGCCCGGCTGGCGGCCGGGCCGCCGGCGCGGCTGGCTGCTGCTCACGCAGCT GCTGGTCGCGGGCGCGATCGCCACGCTCGGCTTCGTGTCGCCGCGCGACTCGATCTGGACGGTCGCCGCGCTCACCACGC TCGTCGCGTTCTTCGGCGCGAGCGCCGACATCGTGATCGACGCGTACCGCCGCGAACTGCTGCGCGACACCGAGCAGGGC CTCGGCAACGCGGTGCACGTGAACGCCTACAAGCTCGCCGCGCTGATTCCCGGCTCGCTGGCGCTGATCCTGTCCGACCA CATGCCGTGGGACGCCGTGTTCGCGATCACCGGCGCATTCATGCTGCCGGGCATCCTGATGACGCTCGTCGTGCGCGAGC CCGAAGTGGTCGGCACGCCGCCGCGCAACCTGCGCGACGCGATCGTGCTGCCGTTCCGCGAATTCATCCAGCGCGACGGC TGGGCCGGCGCGCTGCTGGTCATCGCGTTCATCTTCCTGTTCAAGATCGGCGACACGATGGCGACCACGCTGTCGACGTC GTTCTTCCTCGACATCGGCTTCACGCGCACCGAGATCGGCATCGTCGCCAAAACCACCGCGCTGGTCGCGAGCGTCGCCG GCGGCATCATCGGCGGCGTGTGGCTCGTGAAGATCGGGATCGGCCGCGGGCTGTGGATCTTCGGCGCGCTGCAGATGGTG TCGACCCTCGGCTTCGCGTGGCTCGCGCAGCTCGGCCCCGGCTCGCCGGTGCTGGCCGTGCTGTACGACTTCACGGTATC GACGAGCCACGCGATCGCGTCGGCGCTGTCGGTGTTCGGCGTCGTCGTCACGCCGCAGTTCAGCCCGATGACGGTCGCGC TCGCGATCGTCTACGGCGTCGAAACCTTCACCACCGGCCTGACGATGGCCGCGTTCGTCGCGTACATCGCGAGCACGACC GACCCGCGCTACACGGCCACGCAGTTCGCGCTGTTCACGAGCCTCGCGTCCGTGCCGCGCACGCTCGCGTCGGCCGCGAG CGGCTTCATCGTCGCGAAGATCGGCTGGTTCGACTACTTCATCGTGTGCACCGCGCTCGCGATCCCCGGCATGCTGCTGC TGTTCAAGATCGCGCCGTGGAACGGCGTCGCGCGCAACGGCGAGGCGAGCCGTGCGCAATGA
Upstream 100 bases:
>100_bases GGATGATCCGGCCCGCACGCGCGTGCGGCCGCCCCCTTCTGCGCCGCTCGCGCCGCCTGCGCTGCCGCCGCAATCAGTCA ACGCTACCCAGTTCCATTCC
Downstream 100 bases:
>100_bases CCGCCTGCTTCGCGCCGCACGCGTCGCCGCCGCACTGAGCGTCGGCGTCGCGGCGCTCGGCGCGGCGGCAAGCACGCATC CGACCGACGCCGGGGCAGCC
Product: major facilitator transporter
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWA PLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVSPRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQG LGNAVHVNAYKLAALIPGSLALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGVWLVKIGIGRGLWIFGALQMV STLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFGVVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTT DPRYTATQFALFTSLASVPRTLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ
Sequences:
>Translated_473_residues MSKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWA PLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVSPRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQG LGNAVHVNAYKLAALIPGSLALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGVWLVKIGIGRGLWIFGALQMV STLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFGVVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTT DPRYTATQFALFTSLASVPRTLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ >Mature_472_residues SKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNLKEIGLFALIQFPYTWKFLWAP LMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVSPRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGL GNAVHVNAYKLAALIPGSLALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDGW AGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGVWLVKIGIGRGLWIFGALQMVS TLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFGVVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTTD PRYTATQFALFTSLASVPRTLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli AmpG and yeast YBR220c [H]
Homologues:
Organism=Homo sapiens, GI19923957, Length=279, Percent_Identity=29.3906810035842, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1786636, Length=437, Percent_Identity=35.2402745995423, Blast_Score=251, Evalue=8e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004752 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51225; Mature: 51094
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH KEIGLFALIQFPYTWKFLWAPLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVS HHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGLGNAVHVNAYKLAALIPGSL CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEHHHEEHHCCCCE ALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGV CCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH WLVKIGIGRGLWIFGALQMVSTLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFG HHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEHHHCCHHHHHHHHHHHHH VVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTTDPRYTATQFALFTSLASVPR EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH TLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ HHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC >Mature Secondary Structure SKTPHEAPALTAHEDHPGWRAYLNTHMLICVFLGFTSGLPLFTLVYLVQAWLRSEGVNL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCH KEIGLFALIQFPYTWKFLWAPLMDRYIPRLPGWRPGRRRGWLLLTQLLVAGAIATLGFVS HHHHHHHEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC PRDSIWTVAALTTLVAFFGASADIVIDAYRRELLRDTEQGLGNAVHVNAYKLAALIPGSL CCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCEEEEEHHHEEHHCCCCE ALILSDHMPWDAVFAITGAFMLPGILMTLVVREPEVVGTPPRNLRDAIVLPFREFIQRDG EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC WAGALLVIAFIFLFKIGDTMATTLSTSFFLDIGFTRTEIGIVAKTTALVASVAGGIIGGV CCHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH WLVKIGIGRGLWIFGALQMVSTLGFAWLAQLGPGSPVLAVLYDFTVSTSHAIASALSVFG HHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHEEHHHCCHHHHHHHHHHHHH VVVTPQFSPMTVALAIVYGVETFTTGLTMAAFVAYIASTTDPRYTATQFALFTSLASVPR EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH TLASAASGFIVAKIGWFDYFIVCTALAIPGMLLLFKIAPWNGVARNGEASRAQ HHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1956282; 7542800 [H]