| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is argB [H]
Identifier: 115353194
GI number: 115353194
Start: 3460424
End: 3461458
Strand: Direct
Name: argB [H]
Synonym: Bamb_3143
Alternate gene names: 115353194
Gene position: 3460424-3461458 (Clockwise)
Preceding gene: 115353193
Following gene: 115353195
Centisome position: 97.3
GC content: 64.64
Gene sequence:
>1035_bases ATGGCCAGCGGGCCGCCGCGTATGGCCCGCGGCCCGCGGCACCCACCGTCCGGCCAGCCCAAAAACCCGATGCTGCGCTG CGCCACTCCTGTACAATTCGCCCTGTTTCAACCGTTCCCAGCCAGAGCTGCCGCCATGTCCGAGCCCATCGACCTCTCGC AGATCGCCCCCACGCTGAAAGCAGAAATCCTCGCGGAAGCGCTGCCGTACATCCGTCGCTACCACGGCAAGACCGTGGTC ATCAAATACGGCGGCAATGCGATGACGGAAGAGCGGCTCAAGCAAGGCTTCGCACGCGACGTGATCCTGCTGAAACTGGT CGGCATCAATCCGGTGATCGTCCACGGCGGCGGTCCGCAGATCGATCAGGCACTGAAGAAGATCGGCAAGGCCGGCACCT TCATCCAGGGCATGCGCGTCACCGACGAAGAGACGATGGAAGTCGTCGAATGGGTGCTGGGCGGCGAAGTGCAGCAGGAC ATCGTGACGCTGATCAACCACTTCGGCGGCCACGCGGTGGGCCTGACGGGCAAGGACGGCGGCCTGATCCACGCGCGCAA GCTGCTGATGCCGGACCGCGACAACCCGGGCCAGTACATCGACATCGGCCAGGTCGGCGAAGTCGAGGCGATCAATCCGG CCGTCGTGAAGGCGCTGCAGGACGACGCGTTCATCCCGGTGATCTCGCCGATCGGCTTCGGTGAGGACGGCCTGTCGTAC AACATCAATGCCGACCTCGTCGCCGGCAAGCTCGCGACCGTGCTGAACGCCGAGAAGCTGCTGATGATGACCAACATCCC CGGCGTGATGGACAAGGACGGCAACCTGCTGACCGACCTGTCGGCACGCGAGATCGACGCGCTGTTCGAGGACGGCACGA TCTCGGGCGGCATGCTGCCGAAGATCTCGTCGGCGCTCGACGCCGCGAAGAGCGGCGTGAAGTCGGTGCACATCGTCGAT GGCCGGATCGAGCACTCGGTGCTGCTGGAAATCCTGACCGAGCAGCCGTTCGGCACGATGATCCGCTCGCATTGA
Upstream 100 bases:
>100_bases GGATTTTGCACGTCGGCCGATCGGCCGATGCGTCCCGCAAACACGTCCGGGCACACGCGCCGCCCGCCCGGCCCGCGTCA CCGTCGCGGGGCGCGGCGCC
Downstream 100 bases:
>100_bases GCGCACGCCGCCTGCCCAAGCCTCCCGACCTGCCGGCGTCGCTGCGACGCCGGCGCATCTCCCGCAGCCGGCCGCGCGCC GGCACGCCCGTCTGGCTGTT
Product: acetylglutamate kinase
Products: NA
Alternate protein names: N-acetyl-L-glutamate 5-phosphotransferase; NAG kinase; AGK [H]
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MASGPPRMARGPRHPPSGQPKNPMLRCATPVQFALFQPFPARAAAMSEPIDLSQIAPTLKAEILAEALPYIRRYHGKTVV IKYGGNAMTEERLKQGFARDVILLKLVGINPVIVHGGGPQIDQALKKIGKAGTFIQGMRVTDEETMEVVEWVLGGEVQQD IVTLINHFGGHAVGLTGKDGGLIHARKLLMPDRDNPGQYIDIGQVGEVEAINPAVVKALQDDAFIPVISPIGFGEDGLSY NINADLVAGKLATVLNAEKLLMMTNIPGVMDKDGNLLTDLSAREIDALFEDGTISGGMLPKISSALDAAKSGVKSVHIVD GRIEHSVLLEILTEQPFGTMIRSH
Sequences:
>Translated_344_residues MASGPPRMARGPRHPPSGQPKNPMLRCATPVQFALFQPFPARAAAMSEPIDLSQIAPTLKAEILAEALPYIRRYHGKTVV IKYGGNAMTEERLKQGFARDVILLKLVGINPVIVHGGGPQIDQALKKIGKAGTFIQGMRVTDEETMEVVEWVLGGEVQQD IVTLINHFGGHAVGLTGKDGGLIHARKLLMPDRDNPGQYIDIGQVGEVEAINPAVVKALQDDAFIPVISPIGFGEDGLSY NINADLVAGKLATVLNAEKLLMMTNIPGVMDKDGNLLTDLSAREIDALFEDGTISGGMLPKISSALDAAKSGVKSVHIVD GRIEHSVLLEILTEQPFGTMIRSH >Mature_343_residues ASGPPRMARGPRHPPSGQPKNPMLRCATPVQFALFQPFPARAAAMSEPIDLSQIAPTLKAEILAEALPYIRRYHGKTVVI KYGGNAMTEERLKQGFARDVILLKLVGINPVIVHGGGPQIDQALKKIGKAGTFIQGMRVTDEETMEVVEWVLGGEVQQDI VTLINHFGGHAVGLTGKDGGLIHARKLLMPDRDNPGQYIDIGQVGEVEAINPAVVKALQDDAFIPVISPIGFGEDGLSYN INADLVAGKLATVLNAEKLLMMTNIPGVMDKDGNLLTDLSAREIDALFEDGTISGGMLPKISSALDAAKSGVKSVHIVDG RIEHSVLLEILTEQPFGTMIRSH
Specific function: Arginine biosynthesis; first step. [C]
COG id: COG0548
COG function: function code E; Acetylglutamate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetylglutamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789181, Length=283, Percent_Identity=27.9151943462898, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI145693208, Length=264, Percent_Identity=29.1666666666667, Blast_Score=92, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6320913, Length=270, Percent_Identity=27.4074074074074, Blast_Score=72, Evalue=9e-14,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004662 - InterPro: IPR001048 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.8 [H]
Molecular weight: Translated: 36866; Mature: 36735
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASGPPRMARGPRHPPSGQPKNPMLRCATPVQFALFQPFPARAAAMSEPIDLSQIAPTLK CCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCHHHHHCCCCCHHHHHHHHH AEILAEALPYIRRYHGKTVVIKYGGNAMTEERLKQGFARDVILLKLVGINPVIVHGGGPQ HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEEECCCEEEEECCCCH IDQALKKIGKAGTFIQGMRVTDEETMEVVEWVLGGEVQQDIVTLINHFGGHAVGLTGKDG HHHHHHHHCCCCCEEECEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCC GLIHARKLLMPDRDNPGQYIDIGQVGEVEAINPAVVKALQDDAFIPVISPIGFGEDGLSY CEEEEHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEE NINADLVAGKLATVLNAEKLLMMTNIPGVMDKDGNLLTDLSAREIDALFEDGTISGGMLP CCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCH KISSALDAAKSGVKSVHIVDGRIEHSVLLEILTEQPFGTMIRSH HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure ASGPPRMARGPRHPPSGQPKNPMLRCATPVQFALFQPFPARAAAMSEPIDLSQIAPTLK CCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCCCHHHHHCCCCCHHHHHHHHH AEILAEALPYIRRYHGKTVVIKYGGNAMTEERLKQGFARDVILLKLVGINPVIVHGGGPQ HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEEECCCEEEEECCCCH IDQALKKIGKAGTFIQGMRVTDEETMEVVEWVLGGEVQQDIVTLINHFGGHAVGLTGKDG HHHHHHHHCCCCCEEECEECCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCC GLIHARKLLMPDRDNPGQYIDIGQVGEVEAINPAVVKALQDDAFIPVISPIGFGEDGLSY CEEEEHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEE NINADLVAGKLATVLNAEKLLMMTNIPGVMDKDGNLLTDLSAREIDALFEDGTISGGMLP CCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCH KISSALDAAKSGVKSVHIVDGRIEHSVLLEILTEQPFGTMIRSH HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA