Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353193

Identifier: 115353193

GI number: 115353193

Start: 3460058

End: 3460279

Strand: Direct

Name: 115353193

Synonym: Bamb_3142

Alternate gene names: NA

Gene position: 3460058-3460279 (Clockwise)

Preceding gene: 115353190

Following gene: 115353194

Centisome position: 97.29

GC content: 77.48

Gene sequence:

>222_bases
ATGCGCTGCGCGATCTCGTCGGCGAGGCACTCGGGGCACCGGCAGCGCGCGCCGGCCGCCGGAGGCGCGCCGCCGGGCAC
GACCGGCATCGACGCGCACCAGCAGTCGAACGGCTGGGTACCGGCGCCGCAGTCGAAGCCGCGCCCGCAGTGCGGGCAGC
GCGCGCGGCGCGGGGTCGAACGGGCGTCGAGGGCGGAATCGGTCATGGCGAAGGCGCGGTAA

Upstream 100 bases:

>100_bases
TGGCGGACGAACGCACGCACGAACGCACGAAGGAACGGCCGGACAAGCCGGTGTCTCGGCCGGTTGCACGAGCCTGAGCC
GTCAGCCGGCCGCACCGGCC

Downstream 100 bases:

>100_bases
CGGGCATGAACGTCACCCTACGCGACAAGCATAGCGCGGCGGACGGATTTTGCACGTCGGCCGATCGGCCGATGCGTCCC
GCAAACACGTCCGGGCACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MRCAISSARHSGHRQRAPAAGGAPPGTTGIDAHQQSNGWVPAPQSKPRPQCGQRARRGVERASRAESVMAKAR

Sequences:

>Translated_73_residues
MRCAISSARHSGHRQRAPAAGGAPPGTTGIDAHQQSNGWVPAPQSKPRPQCGQRARRGVERASRAESVMAKAR
>Mature_73_residues
MRCAISSARHSGHRQRAPAAGGAPPGTTGIDAHQQSNGWVPAPQSKPRPQCGQRARRGVERASRAESVMAKAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7711; Mature: 7711

Theoretical pI: Translated: 12.43; Mature: 12.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCAISSARHSGHRQRAPAAGGAPPGTTGIDAHQQSNGWVPAPQSKPRPQCGQRARRGVE
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RASRAESVMAKAR
HHHHHHHHHHHCC
>Mature Secondary Structure
MRCAISSARHSGHRQRAPAAGGAPPGTTGIDAHQQSNGWVPAPQSKPRPQCGQRARRGVE
CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RASRAESVMAKAR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA