Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353090

Identifier: 115353090

GI number: 115353090

Start: 3356073

End: 3356255

Strand: Direct

Name: 115353090

Synonym: Bamb_3039

Alternate gene names: NA

Gene position: 3356073-3356255 (Clockwise)

Preceding gene: 115353087

Following gene: 115353091

Centisome position: 94.36

GC content: 62.84

Gene sequence:

>183_bases
GTGCGAAGTTTGCGCAGCGCTGCTCCCGCTTCCGATGGCAGTTGCGGCTGGCATAGTCCTCGCCTGCTGCACCTGTCGAT
CTACACCATCCTGTCCCGTCGTTCCGTTCGGCGTCACAACGCCGTATCCGCACGTGCATTCGTGGCCGTCGATACCGACG
AAGTCGCGTCGCTGCTGCCATAG

Upstream 100 bases:

>100_bases
CCCGCGCGCCGAAACGATCAGGTGTTCAATACTTTCAACAAACCAGTCGAGTGTAATCGTGAGAGTCCGTGGCCCTCTGG
TGAGGTGGGATCGAGGCGAT

Downstream 100 bases:

>100_bases
CGCCTCTCCCCCTTTTCTCGTCGTTCGTTTCAGCTGCCTGTTTGTCTGCCGCCTCTTTCGCGCGGTGACGGAACGCGTGC
GCGCATCGATTGCCGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MRSLRSAAPASDGSCGWHSPRLLHLSIYTILSRRSVRRHNAVSARAFVAVDTDEVASLLP

Sequences:

>Translated_60_residues
MRSLRSAAPASDGSCGWHSPRLLHLSIYTILSRRSVRRHNAVSARAFVAVDTDEVASLLP
>Mature_60_residues
MRSLRSAAPASDGSCGWHSPRLLHLSIYTILSRRSVRRHNAVSARAFVAVDTDEVASLLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6560; Mature: 6560

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLRSAAPASDGSCGWHSPRLLHLSIYTILSRRSVRRHNAVSARAFVAVDTDEVASLLP
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCC
>Mature Secondary Structure
MRSLRSAAPASDGSCGWHSPRLLHLSIYTILSRRSVRRHNAVSARAFVAVDTDEVASLLP
CCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA