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The map label for this gene is puuD [H]

Identifier: 115353091

GI number: 115353091

Start: 3356487

End: 3357326

Strand: Direct

Name: puuD [H]

Synonym: Bamb_3040

Alternate gene names: 115353091

Gene position: 3356487-3357326 (Clockwise)

Preceding gene: 115353090

Following gene: 115353092

Centisome position: 94.37

GC content: 69.64

Gene sequence:

>840_bases
TTGCCATCTTCGGCGCAACGCACGTGCAAGCCTTATGGACAACTGATTGACGTCATGGAAAGGAAACCCCTCGTCGGCAT
CACCGCCGACTTCACGCAGCTCGGCGCACACGCATCGCACACGGTCGGCGACAAATATGTTGCGGCGATCGTCGACGGCG
CGCATGCGTTCGCGATGGTGCTGCCCGCGCTCGGCGATCGCCAGTCGATCGACGACGTGCTCGACACGGTCGCCGGCCTG
CTGTTTACCGGCAGCTATTCGAACGTCGAGCCGCACCGGTACGGCGGCGAGCCGAGCACCCCGGGCACGAAGCACGACCC
TGCACGCGATGCGACGACGCTGCCGCTGCTGCGCGCGGCGATCACGGCGGGCGTGCCGGTGCTCGCCGTATGCCGCGGCT
TCCAGGAGCTGAACGTCGTCTGCGGCGGCACGCTGCATCAGCACGTGCACGACGTGCCGGGCTTCGCGGATCACCGCGAG
GACGACGCCGCACCGATGGAATCGCAATACGGCCCCGCGCACGTCGTGCACCTGACGCCCGGCGGCAAGCTGCATGCGCT
CGCCGGCGGACGCGACGAAGTGCACGTGAACTCGCTGCACAAGCAGGGCATCGCGCAGCTCGGCTCCGGCCTCGCCGTCG
AAGCCGTCGCACCGGACGGCCTGATCGAGGCCGTGAGCGTCGTCGACGCACCGGCTTTCGCACTCGCCGTGCAATGGCAT
CCGGAATGGCGGCATGCGCAGGATCCGCTGTCGAGCGCGATCTTTCGCGCGTTCGGCGACGCCTGCCGCGCCCGCCGCGC
CGCCCGCACGCACACCACGGCCGCCGCCGCGCTCGCCTGA

Upstream 100 bases:

>100_bases
CGTCGCGCACAGCGCGGGCCGCCACGCGACCCCGTCGTGCCCATTCATCAGCGGCCTTCGCGCTCTGCGCCAGGCTGCGG
GGCTTTGTCGCGCCCGCGTT

Downstream 100 bases:

>100_bases
GCGCGCCGACCCACACAACGAGAACGGACATGCAAGACATGGAAGACTTTCTGAGACAGCACCGGATCACCGAAGTCGAG
GCGATCATCCCCGACATGGC

Product: peptidase C26

Products: NA

Alternate protein names: Gamma-Glu-GABA hydrolase [H]

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MPSSAQRTCKPYGQLIDVMERKPLVGITADFTQLGAHASHTVGDKYVAAIVDGAHAFAMVLPALGDRQSIDDVLDTVAGL
LFTGSYSNVEPHRYGGEPSTPGTKHDPARDATTLPLLRAAITAGVPVLAVCRGFQELNVVCGGTLHQHVHDVPGFADHRE
DDAAPMESQYGPAHVVHLTPGGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWH
PEWRHAQDPLSSAIFRAFGDACRARRAARTHTTAAAALA

Sequences:

>Translated_279_residues
MPSSAQRTCKPYGQLIDVMERKPLVGITADFTQLGAHASHTVGDKYVAAIVDGAHAFAMVLPALGDRQSIDDVLDTVAGL
LFTGSYSNVEPHRYGGEPSTPGTKHDPARDATTLPLLRAAITAGVPVLAVCRGFQELNVVCGGTLHQHVHDVPGFADHRE
DDAAPMESQYGPAHVVHLTPGGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWH
PEWRHAQDPLSSAIFRAFGDACRARRAARTHTTAAAALA
>Mature_278_residues
PSSAQRTCKPYGQLIDVMERKPLVGITADFTQLGAHASHTVGDKYVAAIVDGAHAFAMVLPALGDRQSIDDVLDTVAGLL
FTGSYSNVEPHRYGGEPSTPGTKHDPARDATTLPLLRAAITAGVPVLAVCRGFQELNVVCGGTLHQHVHDVPGFADHRED
DAAPMESQYGPAHVVHLTPGGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWHP
EWRHAQDPLSSAIFRAFGDACRARRAARTHTTAAAALA

Specific function: Involved in the breakdown of putrescine via hydrolysis of the gamma-glutamyl linkage of gamma-glutamyl-gamma- aminobutyrate [H]

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=249, Percent_Identity=40.1606425702811, Blast_Score=187, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: =3.5.1.94 [H]

Molecular weight: Translated: 29301; Mature: 29170

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSSAQRTCKPYGQLIDVMERKPLVGITADFTQLGAHASHTVGDKYVAAIVDGAHAFAMV
CCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHH
LPALGDRQSIDDVLDTVAGLLFTGSYSNVEPHRYGGEPSTPGTKHDPARDATTLPLLRAA
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ITAGVPVLAVCRGFQELNVVCGGTLHQHVHDVPGFADHREDDAAPMESQYGPAHVVHLTP
HHCCCHHHHHHHCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECC
GGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWH
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEC
PEWRHAQDPLSSAIFRAFGDACRARRAARTHTTAAAALA
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSSAQRTCKPYGQLIDVMERKPLVGITADFTQLGAHASHTVGDKYVAAIVDGAHAFAMV
CCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHH
LPALGDRQSIDDVLDTVAGLLFTGSYSNVEPHRYGGEPSTPGTKHDPARDATTLPLLRAA
HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
ITAGVPVLAVCRGFQELNVVCGGTLHQHVHDVPGFADHREDDAAPMESQYGPAHVVHLTP
HHCCCHHHHHHHCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECC
GGKLHALAGGRDEVHVNSLHKQGIAQLGSGLAVEAVAPDGLIEAVSVVDAPAFALAVQWH
CCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEEC
PEWRHAQDPLSSAIFRAFGDACRARRAARTHTTAAAALA
CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]