Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115353087

Identifier: 115353087

GI number: 115353087

Start: 3353226

End: 3353426

Strand: Direct

Name: 115353087

Synonym: Bamb_3036

Alternate gene names: NA

Gene position: 3353226-3353426 (Clockwise)

Preceding gene: 115353084

Following gene: 115353090

Centisome position: 94.28

GC content: 68.66

Gene sequence:

>201_bases
ATGGAATTCGAAGTCCAGGACATGACCTGCGGCGGCTGCGCCAATGCGATCACGCGCGCCGTGACGGCGGCGGACCCGGC
CGCGAAGCTCGACATCGACGTGGCCGCGAAGCTCGTGAAGGTCGAATCGGCGCAAGGCGCCGAGCGTGTGCAGTCGATCA
TCGAGGCGGCGGGCTTCCACCCGGCACTGCGCTCGGCCTGA

Upstream 100 bases:

>100_bases
TAGCTTTTGCGTGACCGCACGTCATGAACGCGCTTGACCTTCCCACCATGGCAAGCTTCATGCTGGGCGTATTCGTCAAT
CGTCAACTCAGGAGAACACG

Downstream 100 bases:

>100_bases
CGCGGGTGCATCACACGCGGGCGCAGTGCCGCTCGGCATCGCGCCCGCATACCGGCCGCGTCAGCGCAGCCGGATCAGCG
TCGACTTCAGTTCGGTGTAC

Product: heavy metal transport/detoxification protein

Products: NA

Alternate protein names: Heavy-Metal-Associated Domain Protein

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MEFEVQDMTCGGCANAITRAVTAADPAAKLDIDVAAKLVKVESAQGAERVQSIIEAAGFHPALRSA

Sequences:

>Translated_66_residues
MEFEVQDMTCGGCANAITRAVTAADPAAKLDIDVAAKLVKVESAQGAERVQSIIEAAGFHPALRSA
>Mature_66_residues
MEFEVQDMTCGGCANAITRAVTAADPAAKLDIDVAAKLVKVESAQGAERVQSIIEAAGFHPALRSA

Specific function: Unknown

COG id: COG2608

COG function: function code P; Copper chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6816; Mature: 6816

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS01047 HMA_1 ; PS50846 HMA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFEVQDMTCGGCANAITRAVTAADPAAKLDIDVAAKLVKVESAQGAERVQSIIEAAGFH
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PALRSA
CCCCCC
>Mature Secondary Structure
MEFEVQDMTCGGCANAITRAVTAADPAAKLDIDVAAKLVKVESAQGAERVQSIIEAAGFH
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PALRSA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA