| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ilvA [H]
Identifier: 115352838
GI number: 115352838
Start: 3074905
End: 3076428
Strand: Direct
Name: ilvA [H]
Synonym: Bamb_2787
Alternate gene names: 115352838
Gene position: 3074905-3076428 (Clockwise)
Preceding gene: 115352820
Following gene: 115352839
Centisome position: 86.46
GC content: 66.8
Gene sequence:
>1524_bases ATGGCATCCCACGATTACCTGAAGAAAATCCTCACCGCGCGCGTCTACGACGTCGCGCTCGAGACGGAACTCGAACCCGC CCGCAACCTGTCGGCCCGACTGCGCAACCCCGTTTACCTGAAGCGCGAGGACAACCAGCCGGTGTTCTCGTTCAAGCTGC GCGGTGCGTACAACAAGATGGCGCACATTCCGGCCGACGCGCTCGCGCGCGGCGTGATCACGGCATCGGCCGGCAATCAT GCGCAGGGCGTCGCGTTCTCGGCGGCCCGGATGGGCATCAAGGCCGTCATCGTCGTGCCCGTCACGACGCCGCAGGTGAA GGTCGACGCGGTGCGCGCCCACGGCGGCCCGAGCGTCGAGGTGATCCAGGCGGGCGAGTCGTACAGCGATGCGTATGCGC ATGCCGTGAAGGTGCAGGCCGAACGCGACCTCACGTTCGTCCACCCGTTCGACGATCCGTACGTGATCGCCGGCCAGGGC ACGATCGCGATGGAAATCCTGCGGCAGCACCAGGGCCCGATTCACGCGATCTTCGTGCCGATCGGCGGCGGCGGCCTCGC GGCCGGCGTGGCCGCGTACGTGAAGGCGGTGCGGCCGGAGATCAAGGTGTTCGGCGTGCAGGCCGAGGATTCGTGCGCGA TGGCGCAGTCGCTGGAAAAAGGCGAGCGCGTCGAGCTGAGCGAAGTCGGGCTGTTTGCGGACGGCACCGCGGTGAAGCTC GTCGGCGAGGAAACCTTCCGGCTCTGCAGCGAGCTCCTCGACGGCGTCGTGACGGTGGACACCGACGCGCTGTGCGCGGC GATCAAGGATGTATTCCAGGACACGCGCAGCGTGCTCGAGCCGTCCGGCGCGCTCGCGGTGGCGGGCGCGAAACGCTACG CGGAACGCGAAGGGATCGAGAACCAGACGCTCGTCGCGGTCACGTCGGGCGCGAACATGAACTTCGACCGGATGCGCTTC GTTGCCGAACGCGCGGAAGTCGGCGAGGCGCGCGAAGCCGTGTTCGCGGTCACGATCCCCGAGGAGCGCGGCAGCTTCAA GCGCTTCTGCTCGCTCGTCGGCGAACGCAACGTGACCGAGTTCAACTACCGGATCGCCGATGCGCAGGCCGCGCATATCT TCGTCGGCGTGCAGATCAAGCGGCGCGGCGAATCGGCGGAGATCGCCGCGAACTTCGAGTCGCACGGCTTCAAGACCGTC GACCTGACGCACGACGAGCTGTCGAAGGAGCACATCCGCTACATGGTGGGCGGCCGCTCGCCGCTCGCGCTCGACGAACG CCTGTTCCGCTTCGAATTCCCGGAACGGCCGGGCGCGCTGATGAAGTTCCTGTCGTCGATGGCGCCGGACTGGAACATCA GCCTGTTCCATTACCGTAACCAGGGTGCGGACTACAGCTCGATCCTCGTCGGGCTGCAGGTGCCGCAGGTCGATCGCGCC GAGTTCGAACGCTTCCTCGCGGCGCTCGGCTATCCGTATGTCGAAGAGAGCGCCAATCCGGCGTACCGGCTCTTCCTGTC GTAA
Upstream 100 bases:
>100_bases TTTCGCGACGGTGCGCCCGGCATGCCGCTTGCGTGCGGGCGGACCCTTGGCGCTATCATTGACGTTTTACCGTCTGCTTC CGCACCGCACGCGAGCGCCC
Downstream 100 bases:
>100_bases AGGCTTCGTGCAATGAATCCCGAACATTCCCCGCTCGGCAAGGCCACCGTCTATGCCGCCCAGTACGACGCGTCGCTGCT GTTCCCGATCCCGCGCGCCG
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MASHDYLKKILTARVYDVALETELEPARNLSARLRNPVYLKREDNQPVFSFKLRGAYNKMAHIPADALARGVITASAGNH AQGVAFSAARMGIKAVIVVPVTTPQVKVDAVRAHGGPSVEVIQAGESYSDAYAHAVKVQAERDLTFVHPFDDPYVIAGQG TIAMEILRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIKVFGVQAEDSCAMAQSLEKGERVELSEVGLFADGTAVKL VGEETFRLCSELLDGVVTVDTDALCAAIKDVFQDTRSVLEPSGALAVAGAKRYAEREGIENQTLVAVTSGANMNFDRMRF VAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGERNVTEFNYRIADAQAAHIFVGVQIKRRGESAEIAANFESHGFKTV DLTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQVDRA EFERFLAALGYPYVEESANPAYRLFLS
Sequences:
>Translated_507_residues MASHDYLKKILTARVYDVALETELEPARNLSARLRNPVYLKREDNQPVFSFKLRGAYNKMAHIPADALARGVITASAGNH AQGVAFSAARMGIKAVIVVPVTTPQVKVDAVRAHGGPSVEVIQAGESYSDAYAHAVKVQAERDLTFVHPFDDPYVIAGQG TIAMEILRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIKVFGVQAEDSCAMAQSLEKGERVELSEVGLFADGTAVKL VGEETFRLCSELLDGVVTVDTDALCAAIKDVFQDTRSVLEPSGALAVAGAKRYAEREGIENQTLVAVTSGANMNFDRMRF VAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGERNVTEFNYRIADAQAAHIFVGVQIKRRGESAEIAANFESHGFKTV DLTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQVDRA EFERFLAALGYPYVEESANPAYRLFLS >Mature_506_residues ASHDYLKKILTARVYDVALETELEPARNLSARLRNPVYLKREDNQPVFSFKLRGAYNKMAHIPADALARGVITASAGNHA QGVAFSAARMGIKAVIVVPVTTPQVKVDAVRAHGGPSVEVIQAGESYSDAYAHAVKVQAERDLTFVHPFDDPYVIAGQGT IAMEILRQHQGPIHAIFVPIGGGGLAAGVAAYVKAVRPEIKVFGVQAEDSCAMAQSLEKGERVELSEVGLFADGTAVKLV GEETFRLCSELLDGVVTVDTDALCAAIKDVFQDTRSVLEPSGALAVAGAKRYAEREGIENQTLVAVTSGANMNFDRMRFV AERAEVGEAREAVFAVTIPEERGSFKRFCSLVGERNVTEFNYRIADAQAAHIFVGVQIKRRGESAEIAANFESHGFKTVD LTHDELSKEHIRYMVGGRSPLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQVDRAE FERFLAALGYPYVEESANPAYRLFLS
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=298, Percent_Identity=34.8993288590604, Blast_Score=148, Evalue=1e-35, Organism=Escherichia coli, GI1790207, Length=504, Percent_Identity=53.3730158730159, Blast_Score=512, Evalue=1e-146, Organism=Escherichia coli, GI1789505, Length=311, Percent_Identity=36.3344051446945, Blast_Score=163, Evalue=3e-41, Organism=Caenorhabditis elegans, GI71991565, Length=325, Percent_Identity=30.1538461538462, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17537387, Length=342, Percent_Identity=30.9941520467836, Blast_Score=128, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17508781, Length=257, Percent_Identity=30.7392996108949, Blast_Score=118, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6320930, Length=517, Percent_Identity=47.3887814313346, Blast_Score=461, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6322631, Length=304, Percent_Identity=33.2236842105263, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6319788, Length=270, Percent_Identity=25.5555555555556, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI21355833, Length=316, Percent_Identity=30.379746835443, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=29.0196078431373, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55444; Mature: 55312
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHDYLKKILTARVYDVALETELEPARNLSARLRNPVYLKREDNQPVFSFKLRGAYNKM CCCHHHHHHHHHHHHHHHHEECCCCHHHCHHHHHCCCEEEEECCCCCEEEEEECCCHHHH AHIPADALARGVITASAGNHAQGVAFSAARMGIKAVIVVPVTTPQVKVDAVRAHGGPSVE HCCCHHHHHCCEEEECCCCCCCCEEEHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCEE VIQAGESYSDAYAHAVKVQAERDLTFVHPFDDPYVIAGQGTIAMEILRQHQGPIHAIFVP EEECCCCCCCHHHEEEEEEECCCEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEE IGGGGLAAGVAAYVKAVRPEIKVFGVQAEDSCAMAQSLEKGERVELSEVGLFADGTAVKL ECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHCCEEECCCEEEE VGEETFRLCSELLDGVVTVDTDALCAAIKDVFQDTRSVLEPSGALAVAGAKRYAEREGIE ECHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCC NQTLVAVTSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGERNVTE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCCEE FNYRIADAQAAHIFVGVQIKRRGESAEIAANFESHGFKTVDLTHDELSKEHIRYMVGGRS EEEEEECCCEEEEEEEEEEEECCCCCEEEECHHHCCEEEEECCHHHHHHHHHHHEECCCC PLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQVDRA CCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHH EFERFLAALGYPYVEESANPAYRLFLS HHHHHHHHHCCCHHHCCCCCEEEEEEC >Mature Secondary Structure ASHDYLKKILTARVYDVALETELEPARNLSARLRNPVYLKREDNQPVFSFKLRGAYNKM CCHHHHHHHHHHHHHHHHEECCCCHHHCHHHHHCCCEEEEECCCCCEEEEEECCCHHHH AHIPADALARGVITASAGNHAQGVAFSAARMGIKAVIVVPVTTPQVKVDAVRAHGGPSVE HCCCHHHHHCCEEEECCCCCCCCEEEHHHHCCEEEEEEEECCCCCEEEEEEECCCCCCEE VIQAGESYSDAYAHAVKVQAERDLTFVHPFDDPYVIAGQGTIAMEILRQHQGPIHAIFVP EEECCCCCCCHHHEEEEEEECCCEEEECCCCCCEEEECCCHHHHHHHHHCCCCEEEEEEE IGGGGLAAGVAAYVKAVRPEIKVFGVQAEDSCAMAQSLEKGERVELSEVGLFADGTAVKL ECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEHHHCCEEECCCEEEE VGEETFRLCSELLDGVVTVDTDALCAAIKDVFQDTRSVLEPSGALAVAGAKRYAEREGIE ECHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCC NQTLVAVTSGANMNFDRMRFVAERAEVGEAREAVFAVTIPEERGSFKRFCSLVGERNVTE CCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECHHCCCHHHHHHHHCCCCCEE FNYRIADAQAAHIFVGVQIKRRGESAEIAANFESHGFKTVDLTHDELSKEHIRYMVGGRS EEEEEECCCEEEEEEEEEEEECCCCCEEEECHHHCCEEEEECCHHHHHHHHHHHEECCCC PLALDERLFRFEFPERPGALMKFLSSMAPDWNISLFHYRNQGADYSSILVGLQVPQVDRA CCHHHHHHHEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHEEEEEECCCCCHH EFERFLAALGYPYVEESANPAYRLFLS HHHHHHHHHCCCHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA