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The map label for this gene is fdhD [H]

Identifier: 115352820

GI number: 115352820

Start: 3051349

End: 3052173

Strand: Direct

Name: fdhD [H]

Synonym: Bamb_2769

Alternate gene names: 115352820

Gene position: 3051349-3052173 (Clockwise)

Preceding gene: 115352818

Following gene: 115352838

Centisome position: 85.8

GC content: 70.91

Gene sequence:

>825_bases
GTGAATCCGACTGAAACAGAAGAACCGCGCGGCGCGATCGAGCTGTCCGTGCGCCGCACGCGCGGCGGCGCGGTCGAGAC
GGCCCACGACTACGTCGGCCAGGAATGGCCCGTCGCGCTGGTCTTCAACGGCATCTCGCACGCGGTGATGATGTGCACGC
CGCGCGACCTCGAGGCGTTCGCGGTCGGCTTCGCGATCTCGGAAGGGATCGTCGAGCGCGGCAGCGACATCAAGGACATC
GACGTGATCCTGCACGCCGACGCGCCGCTGCCGCACGCGGAGGTGCATCTGGAGGTCGTCCAGCAGGCGTTCGCCGCGCT
GAAGGACCGGCGCCGCGCGCTTGCCGGGCGCACCGGCTGCGGCGTGTGCGGGATCGAAAGCATCGACCTGCTCGATCTCG
CGCCGGAACGGGTGCCCGACACCGGCTTTCTCGCGCGCCTCGCGCCCGACGCGCTCGCGCGCGCGGCCCACGCGCTGCCG
GCCCATCAGGCCCTCACGCGGCTGACCGGCGGCCTGCATGCGGCCGCATGGTGCGACGCAACAGGTACGATCCGGATGGC
GTTCGAGGATGTCGGCCGCCACAACGCGCTCGACAAGCTGATCGGCTCGCTCGTGCTGGCACGCGCCGACGCGACCGACG
GCTTCGTGTTCCTGTCGAGCCGGGCAAGCTACGAGCTCGTGCGCAAGTCGGCGCGGGTCGGCATCCCGATGGTCGCGACG
ATCTCCGCGCCGTCGTCGCTCGCGATCGAGATCGCAAAGGCGGCCGGCCTGCGGCTCGTCAGCTTCTGCCGCGAAACCGG
CCACGTCGATTACGGCACGGCCTGA

Upstream 100 bases:

>100_bases
ATGCCGGCGCGGCCGGCCTGCCTGGGGTATTTTAGAACCTCTGCGCGCAAGCGGCGCACACGATCGTCGCCGCCGCTGCG
TCGAATCAACGGGAGTGCTC

Downstream 100 bases:

>100_bases
CGCCGGCCATCCTGCCGTCCGGGCACGCCGGCGGGTCCGTGCCGGCGCGCCCCGCCGCGTCAGTCGAACTGACGGAAATC
CGGCTTGCGCTTCTCGAAGA

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNPTETEEPRGAIELSVRRTRGGAVETAHDYVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAISEGIVERGSDIKDI
DVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALP
AHQALTRLTGGLHAAAWCDATGTIRMAFEDVGRHNALDKLIGSLVLARADATDGFVFLSSRASYELVRKSARVGIPMVAT
ISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA

Sequences:

>Translated_274_residues
MNPTETEEPRGAIELSVRRTRGGAVETAHDYVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAISEGIVERGSDIKDI
DVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALP
AHQALTRLTGGLHAAAWCDATGTIRMAFEDVGRHNALDKLIGSLVLARADATDGFVFLSSRASYELVRKSARVGIPMVAT
ISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA
>Mature_274_residues
MNPTETEEPRGAIELSVRRTRGGAVETAHDYVGQEWPVALVFNGISHAVMMCTPRDLEAFAVGFAISEGIVERGSDIKDI
DVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGCGVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALP
AHQALTRLTGGLHAAAWCDATGTIRMAFEDVGRHNALDKLIGSLVLARADATDGFVFLSSRASYELVRKSARVGIPMVAT
ISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=235, Percent_Identity=45.531914893617, Blast_Score=195, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 29106; Mature: 29106

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTETEEPRGAIELSVRRTRGGAVETAHDYVGQEWPVALVFNGISHAVMMCTPRDLEAF
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEECCCCHHHH
AVGFAISEGIVERGSDIKDIDVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGC
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALPAHQALTRLTGGLHAAAWCDA
CCCCCCCCHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCCHHEEECC
TGTIRMAFEDVGRHNALDKLIGSLVLARADATDGFVFLSSRASYELVRKSARVGIPMVAT
CCEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
ISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA
ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNPTETEEPRGAIELSVRRTRGGAVETAHDYVGQEWPVALVFNGISHAVMMCTPRDLEAF
CCCCCCCCCCCEEEEEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEECCCCHHHH
AVGFAISEGIVERGSDIKDIDVILHADAPLPHAEVHLEVVQQAFAALKDRRRALAGRTGC
HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GVCGIESIDLLDLAPERVPDTGFLARLAPDALARAAHALPAHQALTRLTGGLHAAAWCDA
CCCCCCCCHHHHCCCCCCCCCCHHHHHCHHHHHHHHHHCHHHHHHHHHHCCCCHHEEECC
TGTIRMAFEDVGRHNALDKLIGSLVLARADATDGFVFLSSRASYELVRKSARVGIPMVAT
CCEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEE
ISAPSSLAIEIAKAAGLRLVSFCRETGHVDYGTA
ECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA