Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352808

Identifier: 115352808

GI number: 115352808

Start: 3037633

End: 3038544

Strand: Direct

Name: 115352808

Synonym: Bamb_2757

Alternate gene names: NA

Gene position: 3037633-3038544 (Clockwise)

Preceding gene: 115352807

Following gene: 115352810

Centisome position: 85.41

GC content: 68.86

Gene sequence:

>912_bases
ATGAAAAAGCGTCCGCGGCCACGGCCTGCCGTCGTGGCCCTCGATCATCGCCAGATGGATCTGCCGCTCTTCGACGGGCC
GGCCGCAGCCTCACCGGCAGCGTCGGCGCCCGCCGCGTCGCCCGCGCCACCTGAAGCGGCTGCGGCGCCCGCGGTGCCCA
CCGCACCGCTCGATCCGGGTCCCGCGCGCGATCGCTCCCGCGTCCGTACGTTCGCACTCGACAGCCGCGTGCTCGAATAC
CGCCTCAAGCGCTCCGCGCGCCGCACGATCGGCTTCACGATCGACGGCAGCGGCCTGTCGATCACCGCGCCGCGCTGGGT
CACGCTCGCCGACATCGAAGCGGCGATCGCCGAGAAGCAGCGCTGGATCTTCGCGAAGCTCGCGGAGTGGAAGACCCGCA
CCGAGCAGCGCGCGCTGCCGCAAATCGACTGGCGCGACGGCGCGCAACTCCCGTATCTCGGCAAGACGATCACGATCGCG
CTCGGCGCGGGTGCCGTCGCATTCGACGCCGACGCGCTGCGGCTGTCGCTGCCGCTGCCCGTGCAGGCGGACATGCAGCA
GATCAAGGATCGCGTGCAAGGCTGGCTGCAGGGCGAAGCGAAGCGGATCTTCGGCGAACGGCTGGTGGTCTACGCGGAAA
AGCTCGGCGTCACGTATTCGATGTACGCGCTGTCGTCGGCCGCGACGCGCTGGGGCAGCTGCTCGAGCGACGGCAAGATC
CGGCTGAACTGGCGGCTGATCCATTTCCCGATGTCGATCGTCGACTACGTCGTCGCGCACGAGCTGTCGCACCTGCGCGA
AATGAACCACAGCCCGGCCTTCTGGCAGACCGTCGAATCGATCTTCCCGGAATTCCGCGAAGCACGGCACACGCTCAAGC
ATCACCCGCCCGAACTGCTGCCGGCACTGTAG

Upstream 100 bases:

>100_bases
GATGCGTATCGCCAGCCGGGCAACGCCGGCACGCGCGATGCCGCGCGCGTCTGAATCACCCGGATTGCAGCCGTTGCGAA
CGACGAAACGAAGCGAACTG

Downstream 100 bases:

>100_bases
CGCGATCAGTCGCACCCACAATGCAAACGGGCGATGCGGATTTCTCCGCATCGCCCGTTTTCGTTGCCCGCGACGCACAT
CGTGCGCCGCGAGCCGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc-Dependent Protease; Zinc Metallopeptidase-Like Protein; Zinc Metallopeptidases-Like Protein; Peptidase; Hydrolase; Zinc Metallopeptidase Protein; Protease; Zinc Metallo Protease

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKKRPRPRPAVVALDHRQMDLPLFDGPAAASPAASAPAASPAPPEAAAAPAVPTAPLDPGPARDRSRVRTFALDSRVLEY
RLKRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTITIA
LGAGAVAFDADALRLSLPLPVQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKI
RLNWRLIHFPMSIVDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL

Sequences:

>Translated_303_residues
MKKRPRPRPAVVALDHRQMDLPLFDGPAAASPAASAPAASPAPPEAAAAPAVPTAPLDPGPARDRSRVRTFALDSRVLEY
RLKRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTITIA
LGAGAVAFDADALRLSLPLPVQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKI
RLNWRLIHFPMSIVDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL
>Mature_303_residues
MKKRPRPRPAVVALDHRQMDLPLFDGPAAASPAASAPAASPAPPEAAAAPAVPTAPLDPGPARDRSRVRTFALDSRVLEY
RLKRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQRWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTITIA
LGAGAVAFDADALRLSLPLPVQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKI
RLNWRLIHFPMSIVDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELLPAL

Specific function: Unknown

COG id: COG1451

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33601; Mature: 33601

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRPRPRPAVVALDHRQMDLPLFDGPAAASPAASAPAASPAPPEAAAAPAVPTAPLDPG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PARDRSRVRTFALDSRVLEYRLKRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCEEEHHHHHHHHHHHH
RWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTITIALGAGAVAFDADALRLSLPLP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCEEEECCCC
VQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE
RLNWRLIHFPMSIVDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELL
EEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHC
PAL
CCC
>Mature Secondary Structure
MKKRPRPRPAVVALDHRQMDLPLFDGPAAASPAASAPAASPAPPEAAAAPAVPTAPLDPG
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PARDRSRVRTFALDSRVLEYRLKRSARRTIGFTIDGSGLSITAPRWVTLADIEAAIAEKQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEECCCEEEHHHHHHHHHHHH
RWIFAKLAEWKTRTEQRALPQIDWRDGAQLPYLGKTITIALGAGAVAFDADALRLSLPLP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCEEEECCCC
VQADMQQIKDRVQGWLQGEAKRIFGERLVVYAEKLGVTYSMYALSSAATRWGSCSSDGKI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEE
RLNWRLIHFPMSIVDYVVAHELSHLREMNHSPAFWQTVESIFPEFREARHTLKHHPPELL
EEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHC
PAL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA