| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is plsC [H]
Identifier: 115352807
GI number: 115352807
Start: 3036822
End: 3037586
Strand: Direct
Name: plsC [H]
Synonym: Bamb_2756
Alternate gene names: 115352807
Gene position: 3036822-3037586 (Clockwise)
Preceding gene: 115352806
Following gene: 115352808
Centisome position: 85.39
GC content: 64.71
Gene sequence:
>765_bases ATGCGCTTCGTCCGCTCCCTGCTGCTGCTGATCTACTTCATCCTGTACACGGTGCCGTACGCCACCGCGTGCTTCATCGC GTTCCCGTTCATGCGTCCCGACGCGCGCTACTGGATGGCGGCCGGCTGGTGCAAGTCGACGCTGTGGGTCGTGCGCTGGC TGAACGGCATCCACTACCGGATCGAAGGGATGGAAAACCTGCCCGACGGCCCGGCCGTGCTGCTGTCGAAGCACCAGTCG GCGTGGGAGACGCTCGCGTTTCCGGCGCTGATGCCGAAGCCGCTGTGCTACGTGTTCAAGCGCGAACTGCTCTACGTGCC GTTCTTCGGCTGGGCGCTCGGGCTGCTGCACATGGTCAACATCGACCGCAAGGAAGGCAAGAACGCGTTCACGTCGGTGA TCCGCCAGGGCAAGAAGCGCCTGTCGGAAGGCGCGTGGATGATCATGTTCCCGGAAGGCACGCGCACGCCGGTCGGCAAG CAGGGCAAATACAAGACGGGCGGCGCGCGCTTCGCGATCGAAACCAATACGCCGGTCGTGCCGATCGCGCACAATGCAGG TCGTGTGTGGCCGCGCAATTCGTTCACGAAATTCCCGGGCGTCGTCACCGTGTCGATCGGCAAGCCGATTCCCGTCGACG GCAAGACGCCCGACGTATTGAACTCGCAGGTCGAAGCCTGGATCGAAGCGGAAATGCGCCGCATCGATCCCGATGCGTAT CGCCAGCCGGGCAACGCCGGCACGCGCGATGCCGCGCGCGTCTGA
Upstream 100 bases:
>100_bases GTCCACGACGACCTGCGCGCGTTCGCGCTCGACTTCCTTTCACACGAACACGAGTGATGCGGCCGCCGCGCGCATCCTCC TTACCACCAGACCCACGCCG
Downstream 100 bases:
>100_bases ATCACCCGGATTGCAGCCGTTGCGAACGACGAAACGAAGCGAACTGATGAAAAAGCGTCCGCGGCCACGGCCTGCCGTCG TGGCCCTCGATCATCGCCAG
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIHYRIEGMENLPDGPAVLLSKHQS AWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVNIDRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETNTPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPVDGKTPDVLNSQVEAWIEAEMRRIDPDAY RQPGNAGTRDAARV
Sequences:
>Translated_254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIHYRIEGMENLPDGPAVLLSKHQS AWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVNIDRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETNTPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPVDGKTPDVLNSQVEAWIEAEMRRIDPDAY RQPGNAGTRDAARV >Mature_254_residues MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIHYRIEGMENLPDGPAVLLSKHQS AWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVNIDRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGK QGKYKTGGARFAIETNTPVVPIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPVDGKTPDVLNSQVEAWIEAEMRRIDPDAY RQPGNAGTRDAARV
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=208, Percent_Identity=27.8846153846154, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI15100175, Length=208, Percent_Identity=27.8846153846154, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI6041665, Length=174, Percent_Identity=27.5862068965517, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17564032, Length=271, Percent_Identity=26.5682656826568, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320151, Length=176, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI281364648, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24582856, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24582854, Length=223, Percent_Identity=27.8026905829596, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24641614, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24641612, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 28780; Mature: 28780
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIHYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE IEGMENLPDGPAVLLSKHQSAWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVN EECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC IDRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGKQGKYKTGGARFAIETNTPVV CCHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEE PIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPVDGKTPDVLNSQVEAWIEAEMRRIDPDAY EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH RQPGNAGTRDAARV CCCCCCCCCHHCCC >Mature Secondary Structure MRFVRSLLLLIYFILYTVPYATACFIAFPFMRPDARYWMAAGWCKSTLWVVRWLNGIHYR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEE IEGMENLPDGPAVLLSKHQSAWETLAFPALMPKPLCYVFKRELLYVPFFGWALGLLHMVN EECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC IDRKEGKNAFTSVIRQGKKRLSEGAWMIMFPEGTRTPVGKQGKYKTGGARFAIETNTPVV CCHHCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCEE PIAHNAGRVWPRNSFTKFPGVVTVSIGKPIPVDGKTPDVLNSQVEAWIEAEMRRIDPDAY EEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHH RQPGNAGTRDAARV CCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]