Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352779

Identifier: 115352779

GI number: 115352779

Start: 3006240

End: 3006437

Strand: Direct

Name: 115352779

Synonym: Bamb_2728

Alternate gene names: NA

Gene position: 3006240-3006437 (Clockwise)

Preceding gene: 115352778

Following gene: 115352781

Centisome position: 84.53

GC content: 57.58

Gene sequence:

>198_bases
ATGCTGAGTCCGCATGAATTCGCCACGCTATTGCTTGTGAAGGACGCTCCCGATCAAACCAACATGGATCGGGACGAAAT
CGACGCACTGCTCGAACAGCAGCTCGTCCGCCTGGAAGGGCTCGGCTCGGGACGCAAATACTGCGTGACCGAGACCGGCG
ACGCCGCGTTGCGATCCATCAAATACCGATATTCCTGA

Upstream 100 bases:

>100_bases
GCCAATACAGCTTTCCCCCCAAGCCATACCCCCGTGTGGGGTATCGCGCTGCGGCGTTCGCGCCGGCCGCGCGGGCATAC
TGGTCGCCATGGAGAGAACG

Downstream 100 bases:

>100_bases
ACTACCGCTGCTCCTGACCTGAGCGCGCGCGGCCGGATTTCCGGCCGCGCCGCTTTTCCGCCTTTCCCGCCTCTGTCAGC
TTCCCCGCGTCAGCCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 65; Mature: 65

Protein sequence:

>65_residues
MLSPHEFATLLLVKDAPDQTNMDRDEIDALLEQQLVRLEGLGSGRKYCVTETGDAALRSIKYRYS

Sequences:

>Translated_65_residues
MLSPHEFATLLLVKDAPDQTNMDRDEIDALLEQQLVRLEGLGSGRKYCVTETGDAALRSIKYRYS
>Mature_65_residues
MLSPHEFATLLLVKDAPDQTNMDRDEIDALLEQQLVRLEGLGSGRKYCVTETGDAALRSIKYRYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7343; Mature: 7343

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPHEFATLLLVKDAPDQTNMDRDEIDALLEQQLVRLEGLGSGRKYCVTETGDAALRSI
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
KYRYS
HCCCC
>Mature Secondary Structure
MLSPHEFATLLLVKDAPDQTNMDRDEIDALLEQQLVRLEGLGSGRKYCVTETGDAALRSI
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHH
KYRYS
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA