Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is ypeA [C]

Identifier: 115352590

GI number: 115352590

Start: 2796647

End: 2797114

Strand: Direct

Name: ypeA [C]

Synonym: Bamb_2539

Alternate gene names: 115352590

Gene position: 2796647-2797114 (Clockwise)

Preceding gene: 229221143

Following gene: 115352599

Centisome position: 78.63

GC content: 69.44

Gene sequence:

>468_bases
ATGGATGCCGCCGCCGATACTGTCGCCGATGCTATTGCCATCCGCCCGTTCGAACGCGCCGACACCGATGCCGTGCTGGC
CGTCTGGCGCGACGCCTTCCCGCAGTACGACGAAGCCGGCGCGCCGCCGCACCGCGATCCGCTGCGATCGATCGAGCTGA
AGCTCGCGACGCAGCCGGAGCTGTTCTTCGTCGCGACCTGCGGCGCGCGGGTGGTCGGCACGCTGATGGCGGGTTTCGAC
GGACATCGCGGCTGGCTCTACTCGTTCGGTGTGTCGAACGACGCGCGGCGACTCGGCATCGGCCGCGCGCTGATCGCGCA
TGCGGAACGCGCGCTCGCCGCGCGCGGCTGCCTGAAGATCAATCTGCAGGTGCTGCCCGGCAACGACGATGCGTGCCGCT
TCTATGCGGCGCTCGGCTATCGCGTCGAGGAACGCATCTCGTTCGGCAAGACGCTGCCGGCCGCCTGA

Upstream 100 bases:

>100_bases
CTGCGCTTCATGCCCGCGCTGACCGTGACGACCGAGGAAATCGACCAGATGATGGCGATGCTGCGGTCGATCCTCGACAC
GCTCTAAGGAGACTGCCGCG

Downstream 100 bases:

>100_bases
CGACGCCGGCAGCCGCCCGCCTCAGCGCGTGATCGGCCCCGCGTCCGGCAGCGGATTGCCGAGCGCGTCGGTCGGCACGG
CCTGCTTCTCGAACGCCGCG

Product: putative acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPELFFVATCGARVVGTLMAGFD
GHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKINLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA

Sequences:

>Translated_155_residues
MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPELFFVATCGARVVGTLMAGFD
GHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKINLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA
>Mature_155_residues
MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPELFFVATCGARVVGTLMAGFD
GHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKINLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA

Specific function: Unknown

COG id: COG0456

COG function: function code R; Acetyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI87082104, Length=141, Percent_Identity=38.2978723404255, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023072
- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 16788; Mature: 16788

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPE
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC
LFFVATCGARVVGTLMAGFDGHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKI
EEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE
NLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA
EEEEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDAAADTVADAIAIRPFERADTDAVLAVWRDAFPQYDEAGAPPHRDPLRSIELKLATQPE
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCC
LFFVATCGARVVGTLMAGFDGHRGWLYSFGVSNDARRLGIGRALIAHAERALAARGCLKI
EEEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEE
NLQVLPGNDDACRFYAALGYRVEERISFGKTLPAA
EEEEECCCCCHHHHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA