| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is panC
Identifier: 115352540
GI number: 115352540
Start: 2749766
End: 2750605
Strand: Direct
Name: panC
Synonym: Bamb_2489
Alternate gene names: 115352540
Gene position: 2749766-2750605 (Clockwise)
Preceding gene: 115352539
Following gene: 115352541
Centisome position: 77.32
GC content: 68.33
Gene sequence:
>840_bases ATGAAAGTCATCAGCTCGATCCAGGAACTGCGCGACCAGTTGCGCGGCCAGAACCGCACGGCGTTCGTGCCGACGATGGG CAACCTGCACGAAGGTCACCTGTCGCTGATGCGCCTCGCGCGCCAGCACGGCGACCCGGTCGTGGCGAGCATCTTCGTCA ACCGGCTGCAGTTCGGCCCGAACGAGGATTTCGACAAATATCCGCGCACGCTGCAGGACGACATCGAGAAGCTGCAGAAG GAAAACGTCTACGTGCTGTTCGCGCCGACCGAGCGCGACATGTACCCGGAGCCGCAGGAGTACCGCGTGCTGCCGCCGGA CGACCTCGGCGGGATCCTCGAGGGCGAGTTCCGCCCCGGCTTCTTCGCCGGCGTGTGCACGGTCGTCACGAAGCTGATGT CCTGCGTGCAGCCGCGCGTCGCCGTGTTCGGCAAGAAGGACTACCAGCAGCTGATGATCGTGCGCCGGATGTGCCAGCAG CTCGCGCTGCCGGTCGACATCATCGCGGCCGAGACCGTGCGCGACGAGGACGGCCTCGCGCTGTCGTCGCGCAACCGCTA CCTGACGACCGACGAGCGCAAGGAAGCGCCCGAACTCGCGAAAACACTGCAGCGCGTGCGCGACGGCGTGCTCGGCGGCG AACGCGACCTCGGCAAGCTCGAGCAGACCGCGCGCGCGCACCTGGCCGAGCGCGGCTGGGCGCCCGACTACATCTCGATC CGCCGCCGCGCGAACCTGATCGCGCCGAGCGCCGCCGAGCTCGAAGCCGGCGAGCCGCTCGTCGTGCTCGCGGCCGCGAA GCTCGGCGCGACGCGCCTGATCGACAACCTGGAAATCTGA
Upstream 100 bases:
>100_bases CGCCCGATGCGCCGCCCGCGCGCCGGCGTTCTCCGCTTCGACCCCGACGCCGCTGTTGCGGCGCCAACGCGCGCATGCGC GAGGAACCCGCTACCCGATC
Downstream 100 bases:
>100_bases CGGGCCGCCCGCCCTCGCCTCTCACGCATCACGGAGATACCATGCAGCGCCACATGCTCAAATCGAAGATCCACCGCGCG GCCGTCACGCACTGCGAGCT
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQK ENVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQ LALPVDIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDGVLGGERDLGKLEQTARAHLAERGWAPDYISI RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI
Sequences:
>Translated_279_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQK ENVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQ LALPVDIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDGVLGGERDLGKLEQTARAHLAERGWAPDYISI RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI >Mature_279_residues MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQK ENVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPGFFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQ LALPVDIIAAETVRDEDGLALSSRNRYLTTDERKEAPELAKTLQRVRDGVLGGERDLGKLEQTARAHLAERGWAPDYISI RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=283, Percent_Identity=45.2296819787986, Blast_Score=227, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6322046, Length=299, Percent_Identity=37.7926421404682, Blast_Score=164, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 31364; Mature: 31364
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLQDDIEKLQKENVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPG CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC FFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQLALPVDIIAAETVRDEDGLA HHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE LSSRNRYLTTDERKEAPELAKTLQRVRDGVLGGERDLGKLEQTARAHLAERGWAPDYISI ECCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI HHHHCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHCCCC >Mature Secondary Structure MKVISSIQELRDQLRGQNRTAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGP CHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC NEDFDKYPRTLQDDIEKLQKENVYVLFAPTERDMYPEPQEYRVLPPDDLGGILEGEFRPG CCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC FFAGVCTVVTKLMSCVQPRVAVFGKKDYQQLMIVRRMCQQLALPVDIIAAETVRDEDGLA HHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCE LSSRNRYLTTDERKEAPELAKTLQRVRDGVLGGERDLGKLEQTARAHLAERGWAPDYISI ECCCCCCCCCCHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH RRRANLIAPSAAELEAGEPLVVLAAAKLGATRLIDNLEI HHHHCCCCCCHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA