Click here to switch to the map view.

The map label for this gene is scpA [H]

Identifier: 115352539

GI number: 115352539

Start: 2748624

End: 2749496

Strand: Direct

Name: scpA [H]

Synonym: Bamb_2488

Alternate gene names: 115352539

Gene position: 2748624-2749496 (Clockwise)

Preceding gene: 115352538

Following gene: 115352540

Centisome position: 77.28

GC content: 67.01

Gene sequence:

>873_bases
GTGAGCGCCGCCGACGAGGCCAGCGCCGCCCGGCAGGACGACGCGATCGCCGCGCCCGCGGGCGCCGATTCGACGCCCGA
CACGGTCGACGGCGTCGCGGCGTTCGCGCGCCTGTACGGCGAGCCGCTCTTCAAGCTGCCGCAGGATCTCTACATCCCGC
CCGATGCGCTCGAGATCTTCCTCGAGACGTTCGAAGGCCCGCTCGACCTGCTGCTGTACCTGATCCGCAAGCAGAACTTC
AACGTGCTCGACATCCCGATGGCGCAGGTCACCGCGCAATATCTCGGTTATGTCGACCAGATCCGCACGTCGAACCTCGA
GCTGGCCGCCGAATACCTGCTGATGGCCGCGATGCTGATCGAAATCAAGTCGCGGATGCTGCTGCCGGTCAAGAAGGCCG
ACACCGGCGAGGAAGCCGAGGATCCGCGCGCGGAGCTCGTGCGCCGCCTGCTCGAGTACGAGCAGATGAAACTTGCCGCG
CAGCGCCTCGACCAGCTGCCGCAGCTCGGCCGCGACTTCCTGCGCGCCGAGGTCTACATCGAGCAGAGCACCACGCCGCG
CTTCCCGGACGTCGATTCGAACGACCTGCGCGCCGCGTGGGCCGACGTGCTCAAGCGCGCGAAGCTCGTCCAGCACCACA
AGATCTCCCGCGAGGAGCTGTCGGTGCGCGAACACATGAGCCTGATCCTGCGCCGGCTGCAGAATGCACGCTTCATGGAG
TTCGCCGACCTGTTCGACACGTCGCGCGGCGTGCCGGTCGTCGTCGTGAACTTCATCGCGATGCTCGAGCTCGCGCGCGA
ATCGCTGCTCGAGATCACGCAGGCCGAACCGTTCGCGCCGATCTACGTGCGCCTCGCCTACCTGCCCGCATAA

Upstream 100 bases:

>100_bases
CTGTGGGACAAGCAGCCGATCGACCTCGACGAGCGCGCCGAGCAGCAGGAATCGCGCGTGAAGCAAACGTCCTACGTCTA
CTACCAGAACTTCTAAGCAC

Downstream 100 bases:

>100_bases
CGCGCGCCGCCGCGGCCGGGGCGTCCCCGCACACCGCCATACACCTCTACGCACCGCATTGCGCCGCCGGGCCCGCCCGC
GCGGCCGGCCCACGGCATGC

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSAADEASAARQDDAIAAPAGADSTPDTVDGVAAFARLYGEPLFKLPQDLYIPPDALEIFLETFEGPLDLLLYLIRKQNF
NVLDIPMAQVTAQYLGYVDQIRTSNLELAAEYLLMAAMLIEIKSRMLLPVKKADTGEEAEDPRAELVRRLLEYEQMKLAA
QRLDQLPQLGRDFLRAEVYIEQSTTPRFPDVDSNDLRAAWADVLKRAKLVQHHKISREELSVREHMSLILRRLQNARFME
FADLFDTSRGVPVVVVNFIAMLELARESLLEITQAEPFAPIYVRLAYLPA

Sequences:

>Translated_290_residues
MSAADEASAARQDDAIAAPAGADSTPDTVDGVAAFARLYGEPLFKLPQDLYIPPDALEIFLETFEGPLDLLLYLIRKQNF
NVLDIPMAQVTAQYLGYVDQIRTSNLELAAEYLLMAAMLIEIKSRMLLPVKKADTGEEAEDPRAELVRRLLEYEQMKLAA
QRLDQLPQLGRDFLRAEVYIEQSTTPRFPDVDSNDLRAAWADVLKRAKLVQHHKISREELSVREHMSLILRRLQNARFME
FADLFDTSRGVPVVVVNFIAMLELARESLLEITQAEPFAPIYVRLAYLPA
>Mature_289_residues
SAADEASAARQDDAIAAPAGADSTPDTVDGVAAFARLYGEPLFKLPQDLYIPPDALEIFLETFEGPLDLLLYLIRKQNFN
VLDIPMAQVTAQYLGYVDQIRTSNLELAAEYLLMAAMLIEIKSRMLLPVKKADTGEEAEDPRAELVRRLLEYEQMKLAAQ
RLDQLPQLGRDFLRAEVYIEQSTTPRFPDVDSNDLRAAWADVLKRAKLVQHHKISREELSVREHMSLILRRLQNARFMEF
ADLFDTSRGVPVVVVNFIAMLELARESLLEITQAEPFAPIYVRLAYLPA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32764; Mature: 32633

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADEASAARQDDAIAAPAGADSTPDTVDGVAAFARLYGEPLFKLPQDLYIPPDALEIF
CCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHCCCCHHHHHHH
LETFEGPLDLLLYLIRKQNFNVLDIPMAQVTAQYLGYVDQIRTSNLELAAEYLLMAAMLI
HHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EIKSRMLLPVKKADTGEEAEDPRAELVRRLLEYEQMKLAAQRLDQLPQLGRDFLRAEVYI
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
EQSTTPRFPDVDSNDLRAAWADVLKRAKLVQHHKISREELSVREHMSLILRRLQNARFME
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH
FADLFDTSRGVPVVVVNFIAMLELARESLLEITQAEPFAPIYVRLAYLPA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEECCC
>Mature Secondary Structure 
SAADEASAARQDDAIAAPAGADSTPDTVDGVAAFARLYGEPLFKLPQDLYIPPDALEIF
CCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCHHCCCCHHHHHHH
LETFEGPLDLLLYLIRKQNFNVLDIPMAQVTAQYLGYVDQIRTSNLELAAEYLLMAAMLI
HHHHCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
EIKSRMLLPVKKADTGEEAEDPRAELVRRLLEYEQMKLAAQRLDQLPQLGRDFLRAEVYI
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
EQSTTPRFPDVDSNDLRAAWADVLKRAKLVQHHKISREELSVREHMSLILRRLQNARFME
ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH
FADLFDTSRGVPVVVVNFIAMLELARESLLEITQAEPFAPIYVRLAYLPA
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]