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The map label for this gene is panD [H]

Identifier: 115352541

GI number: 115352541

Start: 2750647

End: 2751033

Strand: Direct

Name: panD [H]

Synonym: Bamb_2490

Alternate gene names: 115352541

Gene position: 2750647-2751033 (Clockwise)

Preceding gene: 115352540

Following gene: 115352546

Centisome position: 77.34

GC content: 62.27

Gene sequence:

>387_bases
ATGCAGCGCCACATGCTCAAATCGAAGATCCACCGCGCGGCCGTCACGCACTGCGAGCTGCATTACGAAGGCTCGTGCGC
GATCGACGAAGATCTGCTCGAAGCGGCGAACCTCGTCGAAAACGAACGGATCGACATCTGGAACATCAACAACGGCGAGC
GCTTCTCGACGTACGCAATCAAGGGCGAGCGCGGCAGCGGGATGATCTCGCTGAACGGCTCGGCCGCACGCCGCGCCCAA
CTCGGCGACCTCGTGATCATCGCGGCGTTCGCGATGGTCGACGAAGCCGAGCTGCAGGCCGGCTGGAAGCCGAAACTCGT
GTTCATCGACGAAGGCAACAAGATCAAGGGCCACCGCGATCACGTGCCGACGCAGAACTGGACCTGA

Upstream 100 bases:

>100_bases
TCGTGCTCGCGGCCGCGAAGCTCGGCGCGACGCGCCTGATCGACAACCTGGAAATCTGACGGGCCGCCCGCCCTCGCCTC
TCACGCATCACGGAGATACC

Downstream 100 bases:

>100_bases
GCCACGCGGCCGCCGGCGTGTCGCGACACGCTGGGTTGTTGTATCGCGGCGCCCCGCGCGCCGTTGCTGCCGGTGTCGTG
CAGCCGTAGACGTACGAAGG

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MQRHMLKSKIHRAAVTHCELHYEGSCAIDEDLLEAANLVENERIDIWNINNGERFSTYAIKGERGSGMISLNGSAARRAQ
LGDLVIIAAFAMVDEAELQAGWKPKLVFIDEGNKIKGHRDHVPTQNWT

Sequences:

>Translated_128_residues
MQRHMLKSKIHRAAVTHCELHYEGSCAIDEDLLEAANLVENERIDIWNINNGERFSTYAIKGERGSGMISLNGSAARRAQ
LGDLVIIAAFAMVDEAELQAGWKPKLVFIDEGNKIKGHRDHVPTQNWT
>Mature_128_residues
MQRHMLKSKIHRAAVTHCELHYEGSCAIDEDLLEAANLVENERIDIWNINNGERFSTYAIKGERGSGMISLNGSAARRAQ
LGDLVIIAAFAMVDEAELQAGWKPKLVFIDEGNKIKGHRDHVPTQNWT

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=125, Percent_Identity=52.8, Blast_Score=143, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 14354; Mature: 14354

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHMLKSKIHRAAVTHCELHYEGSCAIDEDLLEAANLVENERIDIWNINNGERFSTYAI
CCCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE
KGERGSGMISLNGSAARRAQLGDLVIIAAFAMVDEAELQAGWKPKLVFIDEGNKIKGHRD
ECCCCCEEEEECCCCCCHHCCCCCCEEHHHHHHCHHHHCCCCCCEEEEEECCCCCCCCCC
HVPTQNWT
CCCCCCCC
>Mature Secondary Structure
MQRHMLKSKIHRAAVTHCELHYEGSCAIDEDLLEAANLVENERIDIWNINNGERFSTYAI
CCCHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEEE
KGERGSGMISLNGSAARRAQLGDLVIIAAFAMVDEAELQAGWKPKLVFIDEGNKIKGHRD
ECCCCCEEEEECCCCCCHHCCCCCCEEHHHHHHCHHHHCCCCCCEEEEEECCCCCCCCCC
HVPTQNWT
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA