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The map label for this gene is intZ [C]

Identifier: 115352465

GI number: 115352465

Start: 2663267

End: 2664343

Strand: Direct

Name: intZ [C]

Synonym: Bamb_2414

Alternate gene names: 115352465

Gene position: 2663267-2664343 (Clockwise)

Preceding gene: 115352464

Following gene: 115352466

Centisome position: 74.88

GC content: 64.25

Gene sequence:

>1077_bases
ATGAGCTATCAACTTTTTCGCGTCGGCAAGGTCTGGCACTGCCGCTTCCAAATCAACGGCACACGCCAGCAACGTTCAAC
ACGTGAAACCGATCGACAGCGCGCCGAGCAAGTTGCGGAGGCGGCTGTTCGCCAGGCAAAGCTTTGGACACGCGACAGCA
AGGAGTTGCCGACCTTACGTGAGCTCGTACGCCAATGGCTCGTTGTCCACGAGTCGACAGCCAGTCGCGCACACGTCAAG
GTCGTGGAGACGTTCGGGCGACTTCACCTCTACGATCTGGCCGACGTGCTGATCGACGAGCTGTCGACCGATCGCGTCGA
GTTCGCGCGCGTGCGGCACCTTGAATCGCATGCGCCGGTATCGGCGAATCAGTGGCTCAAGGTGCTGCGCCTGCTCTGCA
ATTGGGCCGTACGGCGCGGCATCCTGGCGGCCGTCCCGTTCCGTGTCCGCGCGCTGAAGGTCCAGAAGAAGCCGCGGGCG
ATCCTGCCCGTCGCAATGGCCCGGGCATGGCTAGATGCCATCGACGCGGGCGAAGGCAATCGCGCCGGGGTCCGCACTGC
AGTGCGCCTGATGCTCGGCCTGGGCCTGCGCGAATCGGAGACCATTACGGCACGATGGGAATGGCTCGACGTCGGGCGCC
AGACCTACACGCCGGGTCGGACGAAGGGCCGCGAGGCTGATCCGATCCCCGTTCCGGCCTGGTTGATCGACTACCTGATG
GCAGACTGGAAGGCGGCCGGCCCAATCCTGCAGAAAGCGAACGGTTGCCCGTATCCGGCTGGCTTCACGCGTTCGGCGAT
GTTGGCGGCCAACCGGGCAGTCGGTGCCCCCCACATCACCGCGCATCGACTACGCGGCACGTTCGCAACGTTGCTCTCTG
AAGCCGGTGTCCCGGTGCAATCGATCCAACGAGCCCTTCGCCACAAGAACCTGACGACGACAGCGGCCTATCTCGAGGTC
GACATGGGCACCGTGGCCGCCGGCCAGCAACGCATCGCAGAGAAGATCGGTCTCGGATTACACACGGAAACCAGTGGCGC
GCCAGTGGCGAACTGTGACCCGCAACCCCAGCAATGA

Upstream 100 bases:

>100_bases
AGCCACGGGCTTTACTGCAAGCCCTGGCATCGTGATTTTCTACGAGTACCAGTAGCGAAACGGATGAGTCGCCTGCTGGG
CGATCGCCATATCTATATCG

Downstream 100 bases:

>100_bases
CAAGGAATCGTGATCCCAAATGGTCATCGTGAATTCGTGCGCCGGTCGATCGGATCTCGCTCGCAAAACGGCCACCGGCG
ACACGGAATTCGGCCCTTCG

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSYQLFRVGKVWHCRFQINGTRQQRSTRETDRQRAEQVAEAAVRQAKLWTRDSKELPTLRELVRQWLVVHESTASRAHVK
VVETFGRLHLYDLADVLIDELSTDRVEFARVRHLESHAPVSANQWLKVLRLLCNWAVRRGILAAVPFRVRALKVQKKPRA
ILPVAMARAWLDAIDAGEGNRAGVRTAVRLMLGLGLRESETITARWEWLDVGRQTYTPGRTKGREADPIPVPAWLIDYLM
ADWKAAGPILQKANGCPYPAGFTRSAMLAANRAVGAPHITAHRLRGTFATLLSEAGVPVQSIQRALRHKNLTTTAAYLEV
DMGTVAAGQQRIAEKIGLGLHTETSGAPVANCDPQPQQ

Sequences:

>Translated_358_residues
MSYQLFRVGKVWHCRFQINGTRQQRSTRETDRQRAEQVAEAAVRQAKLWTRDSKELPTLRELVRQWLVVHESTASRAHVK
VVETFGRLHLYDLADVLIDELSTDRVEFARVRHLESHAPVSANQWLKVLRLLCNWAVRRGILAAVPFRVRALKVQKKPRA
ILPVAMARAWLDAIDAGEGNRAGVRTAVRLMLGLGLRESETITARWEWLDVGRQTYTPGRTKGREADPIPVPAWLIDYLM
ADWKAAGPILQKANGCPYPAGFTRSAMLAANRAVGAPHITAHRLRGTFATLLSEAGVPVQSIQRALRHKNLTTTAAYLEV
DMGTVAAGQQRIAEKIGLGLHTETSGAPVANCDPQPQQ
>Mature_357_residues
SYQLFRVGKVWHCRFQINGTRQQRSTRETDRQRAEQVAEAAVRQAKLWTRDSKELPTLRELVRQWLVVHESTASRAHVKV
VETFGRLHLYDLADVLIDELSTDRVEFARVRHLESHAPVSANQWLKVLRLLCNWAVRRGILAAVPFRVRALKVQKKPRAI
LPVAMARAWLDAIDAGEGNRAGVRTAVRLMLGLGLRESETITARWEWLDVGRQTYTPGRTKGREADPIPVPAWLIDYLMA
DWKAAGPILQKANGCPYPAGFTRSAMLAANRAVGAPHITAHRLRGTFATLLSEAGVPVQSIQRALRHKNLTTTAAYLEVD
MGTVAAGQQRIAEKIGLGLHTETSGAPVANCDPQPQQ

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39969; Mature: 39837

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYQLFRVGKVWHCRFQINGTRQQRSTRETDRQRAEQVAEAAVRQAKLWTRDSKELPTLR
CCCEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ELVRQWLVVHESTASRAHVKVVETFGRLHLYDLADVLIDELSTDRVEFARVRHLESHAPV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SANQWLKVLRLLCNWAVRRGILAAVPFRVRALKVQKKPRAILPVAMARAWLDAIDAGEGN
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
RAGVRTAVRLMLGLGLRESETITARWEWLDVGRQTYTPGRTKGREADPIPVPAWLIDYLM
CHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ADWKAAGPILQKANGCPYPAGFTRSAMLAANRAVGAPHITAHRLRGTFATLLSEAGVPVQ
HHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH
SIQRALRHKNLTTTAAYLEVDMGTVAAGQQRIAEKIGLGLHTETSGAPVANCDPQPQQ
HHHHHHHHCCCCEEHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SYQLFRVGKVWHCRFQINGTRQQRSTRETDRQRAEQVAEAAVRQAKLWTRDSKELPTLR
CCEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ELVRQWLVVHESTASRAHVKVVETFGRLHLYDLADVLIDELSTDRVEFARVRHLESHAPV
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
SANQWLKVLRLLCNWAVRRGILAAVPFRVRALKVQKKPRAILPVAMARAWLDAIDAGEGN
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
RAGVRTAVRLMLGLGLRESETITARWEWLDVGRQTYTPGRTKGREADPIPVPAWLIDYLM
CHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
ADWKAAGPILQKANGCPYPAGFTRSAMLAANRAVGAPHITAHRLRGTFATLLSEAGVPVQ
HHHHHCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHH
SIQRALRHKNLTTTAAYLEVDMGTVAAGQQRIAEKIGLGLHTETSGAPVANCDPQPQQ
HHHHHHHHCCCCEEHHEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA