Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352464

Identifier: 115352464

GI number: 115352464

Start: 2662028

End: 2663221

Strand: Direct

Name: 115352464

Synonym: Bamb_2413

Alternate gene names: NA

Gene position: 2662028-2663221 (Clockwise)

Preceding gene: 115352463

Following gene: 115352465

Centisome position: 74.85

GC content: 63.99

Gene sequence:

>1194_bases
GTGACTCTCACCATGAAACGTCTCCTCATCGCGCTCATCGCTAGCGCAATCTCGATCGCGTCTGGCGCAGCGACGTACGT
TCCAGTCACTCTGCTGAATCCGGCCGGATCGACGACAGGACAGGCCATCATTTCGAACGGCCCGTCGAGTGGGCCGGCCT
GGTCCTCGATCGTCGATTCGGTCGTTGCAGGCTCCGGAGTCGCTGTCAGCGGCGCCACCGGCAACGTCACCGTATCGGTT
GCGACGAATGGTATTGCGCTCGGCCAGATCGCGCAGCAGGCCGCGAACTCCGTGCTTGCAAATGCGACGAGCTCGATGGG
CAACGTGACCGCATTCACGATGCCGAGCTGCAGCAGCTCTGTAAACGCGCTGCAATGGACGAGCGGAAGCGGATTTGCAT
GCAACTCGAGCATCAATGCGGCAAGCCTCGGTGGCACCGCGGCCGCATCCTATGCTCTGCTCGCCTCGCCGTCGCTCACC
GGCACGCCGACGGCGCCGACTGCGACCACCGGCACAAATACGACGCAGCTCGCGACGACGGCGTTCGTCAACAACTCGAT
CACGGCTGCAACTGGACGCCTGCTGAATGTGCAGGTTTTCAGCACGAGCGGCACCTATACGCCGACTACGGGAACAACCC
ACGCACTGCTTCGAGTCCAGGCACCGGGCGGCGGATCGGGCGGCACATCGACCACGACGTCGTCGACCATCAGCATCAGT
GCGCCCGGTTCTGCCGGCTCATTTGCGGAAGCTTGGTGGAGTGCGCCGGCATCTCAGACCGTAACCATCGGCTCCCCTGG
AACAGGTGGTGCAGCCGCGGGTGCCGGTGGAACGGGCGGCACCACCAGCGTGGGATCGATCATTTCGTGTCCGGGCGGCA
TTGGTGGCAGCGCGGGTGCAGCCAGTACGCCACCGTTTGTGGTTGCGCCTGCAGCGTCGCCCTCTTCCTGCACGATTTCT
GGGGCAACCGCGGTTCTCTCGATTGGGGGTGGGCGCGGGCAGTTTGCCCACGCACTGTCGACATCCGCCGCCGATGTGCC
AACAGGCGGATCCGGATACCTCGGCTCGGCCAGCTATGGGACACCGCCCGGATACGGTTCAGGCGCGAGCGGAGCGTCTA
TCGGTATCAGCGCAACCGGAGCCACGGGCTTTACTGCAAGCCCTGGCATCGTGATTTTCTACGAGTACCAGTAG

Upstream 100 bases:

>100_bases
CATACGCGATCGCCAATAGCCTTTTCGCTGGCAACTCCACCGGATCGCTGCTCGACAACGGAACAGGCAGTTCTAAGTCC
GTCAACAACAACCTTCTTTC

Downstream 100 bases:

>100_bases
CGAAACGGATGAGTCGCCTGCTGGGCGATCGCCATATCTATATCGATGAGCTATCAACTTTTTCGCGTCGGCAAGGTCTG
GCACTGCCGCTTCCAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTLTMKRLLIALIASAISIASGAATYVPVTLLNPAGSTTGQAIISNGPSSGPAWSSIVDSVVAGSGVAVSGATGNVTVSV
ATNGIALGQIAQQAANSVLANATSSMGNVTAFTMPSCSSSVNALQWTSGSGFACNSSINAASLGGTAAASYALLASPSLT
GTPTAPTATTGTNTTQLATTAFVNNSITAATGRLLNVQVFSTSGTYTPTTGTTHALLRVQAPGGGSGGTSTTTSSTISIS
APGSAGSFAEAWWSAPASQTVTIGSPGTGGAAAGAGGTGGTTSVGSIISCPGGIGGSAGAASTPPFVVAPAASPSSCTIS
GATAVLSIGGGRGQFAHALSTSAADVPTGGSGYLGSASYGTPPGYGSGASGASIGISATGATGFTASPGIVIFYEYQ

Sequences:

>Translated_397_residues
MTLTMKRLLIALIASAISIASGAATYVPVTLLNPAGSTTGQAIISNGPSSGPAWSSIVDSVVAGSGVAVSGATGNVTVSV
ATNGIALGQIAQQAANSVLANATSSMGNVTAFTMPSCSSSVNALQWTSGSGFACNSSINAASLGGTAAASYALLASPSLT
GTPTAPTATTGTNTTQLATTAFVNNSITAATGRLLNVQVFSTSGTYTPTTGTTHALLRVQAPGGGSGGTSTTTSSTISIS
APGSAGSFAEAWWSAPASQTVTIGSPGTGGAAAGAGGTGGTTSVGSIISCPGGIGGSAGAASTPPFVVAPAASPSSCTIS
GATAVLSIGGGRGQFAHALSTSAADVPTGGSGYLGSASYGTPPGYGSGASGASIGISATGATGFTASPGIVIFYEYQ
>Mature_396_residues
TLTMKRLLIALIASAISIASGAATYVPVTLLNPAGSTTGQAIISNGPSSGPAWSSIVDSVVAGSGVAVSGATGNVTVSVA
TNGIALGQIAQQAANSVLANATSSMGNVTAFTMPSCSSSVNALQWTSGSGFACNSSINAASLGGTAAASYALLASPSLTG
TPTAPTATTGTNTTQLATTAFVNNSITAATGRLLNVQVFSTSGTYTPTTGTTHALLRVQAPGGGSGGTSTTTSSTISISA
PGSAGSFAEAWWSAPASQTVTIGSPGTGGAAAGAGGTGGTTSVGSIISCPGGIGGSAGAASTPPFVVAPAASPSSCTISG
ATAVLSIGGGRGQFAHALSTSAADVPTGGSGYLGSASYGTPPGYGSGASGASIGISATGATGFTASPGIVIFYEYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37306; Mature: 37175

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTMKRLLIALIASAISIASGAATYVPVTLLNPAGSTTGQAIISNGPSSGPAWSSIVDS
CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHH
VVAGSGVAVSGATGNVTVSVATNGIALGQIAQQAANSVLANATSSMGNVTAFTMPSCSSS
HHCCCCEEEECCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
VNALQWTSGSGFACNSSINAASLGGTAAASYALLASPSLTGTPTAPTATTGTNTTQLATT
CCEEEEECCCCEEECCCCCCCCCCCHHHHCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
AFVNNSITAATGRLLNVQVFSTSGTYTPTTGTTHALLRVQAPGGGSGGTSTTTSSTISIS
EEECCCEEECCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEE
APGSAGSFAEAWWSAPASQTVTIGSPGTGGAAAGAGGTGGTTSVGSIISCPGGIGGSAGA
CCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
ASTPPFVVAPAASPSSCTISGATAVLSIGGGRGQFAHALSTSAADVPTGGSGYLGSASYG
CCCCCEEEEECCCCCCEEEECCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
TPPGYGSGASGASIGISATGATGFTASPGIVIFYEYQ
CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TLTMKRLLIALIASAISIASGAATYVPVTLLNPAGSTTGQAIISNGPSSGPAWSSIVDS
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHH
VVAGSGVAVSGATGNVTVSVATNGIALGQIAQQAANSVLANATSSMGNVTAFTMPSCSSS
HHCCCCEEEECCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
VNALQWTSGSGFACNSSINAASLGGTAAASYALLASPSLTGTPTAPTATTGTNTTQLATT
CCEEEEECCCCEEECCCCCCCCCCCHHHHCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE
AFVNNSITAATGRLLNVQVFSTSGTYTPTTGTTHALLRVQAPGGGSGGTSTTTSSTISIS
EEECCCEEECCCEEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEE
APGSAGSFAEAWWSAPASQTVTIGSPGTGGAAAGAGGTGGTTSVGSIISCPGGIGGSAGA
CCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
ASTPPFVVAPAASPSSCTISGATAVLSIGGGRGQFAHALSTSAADVPTGGSGYLGSASYG
CCCCCEEEEECCCCCCEEEECCEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
TPPGYGSGASGASIGISATGATGFTASPGIVIFYEYQ
CCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA