Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352466

Identifier: 115352466

GI number: 115352466

Start: 2664752

End: 2665318

Strand: Direct

Name: 115352466

Synonym: Bamb_2415

Alternate gene names: NA

Gene position: 2664752-2665318 (Clockwise)

Preceding gene: 115352465

Following gene: 115352467

Centisome position: 74.93

GC content: 62.61

Gene sequence:

>567_bases
ATGGCATTCATGAAGCAGTCGGAATTTGCGGACCTGTGCGGCGTGTCACGACAGGCCGTGCTCAACTGGAAGCGCGAGGG
CAAGCTCGTGATGCAGGGCGCGCGCGTCGATGTCGATGCGTCCCTGGCTCGGCTCAGCCGGGTTCGGCGCGACGGCTCGC
CCGTTCAGCTCGACGCGGGCAAGGAGGCAGTCGTCGACATCGAGATCCAGCCCGGCGAATCACTCGACCAGGCAGCAGAA
CGCCTTGCTGGCGAGATCGACGTCGACAGCACAAGTTTTGACGAAGCCAGGCGCATTAAGGAGGTCTATCTCGCCCTACT
GCACCGCCTCGATTTCGAAAAGAAGTCTGGCGCCCTAGTGGAGCTCGACACGGCGAGCACAGTCCTGTTCGAGGAGTTCC
GGGCTCAGCGCGATGCGTGGCTCAACTGGCCAGCGAAGGTCGGGCCACTGATTGCCTCCGAACTCGGCATCGAGGCCGAC
AAGATCACCTCGGTGCTGGTCGCCCATGTCCACAAGCAGATTGCACAACTGGGGGAGCCGGAGGTTCAGTTCAGCGAGGA
ACGCTGA

Upstream 100 bases:

>100_bases
GTCAAGTTGGTTGACAGCAGGTTGACAAATTGACGGGCGAACGAGCTCGAGCATCCAATTTCGCGGCCGTTCCGGCCGCA
CCTTGCCAGAGGAAATCAAT

Downstream 100 bases:

>100_bases
TCGTTTGACGCACTGCAGCAGTCCGCGTACACTTCGCGCCGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACC
CGAAGGTCATAGGTTCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAFMKQSEFADLCGVSRQAVLNWKREGKLVMQGARVDVDASLARLSRVRRDGSPVQLDAGKEAVVDIEIQPGESLDQAAE
RLAGEIDVDSTSFDEARRIKEVYLALLHRLDFEKKSGALVELDTASTVLFEEFRAQRDAWLNWPAKVGPLIASELGIEAD
KITSVLVAHVHKQIAQLGEPEVQFSEER

Sequences:

>Translated_188_residues
MAFMKQSEFADLCGVSRQAVLNWKREGKLVMQGARVDVDASLARLSRVRRDGSPVQLDAGKEAVVDIEIQPGESLDQAAE
RLAGEIDVDSTSFDEARRIKEVYLALLHRLDFEKKSGALVELDTASTVLFEEFRAQRDAWLNWPAKVGPLIASELGIEAD
KITSVLVAHVHKQIAQLGEPEVQFSEER
>Mature_187_residues
AFMKQSEFADLCGVSRQAVLNWKREGKLVMQGARVDVDASLARLSRVRRDGSPVQLDAGKEAVVDIEIQPGESLDQAAER
LAGEIDVDSTSFDEARRIKEVYLALLHRLDFEKKSGALVELDTASTVLFEEFRAQRDAWLNWPAKVGPLIASELGIEADK
ITSVLVAHVHKQIAQLGEPEVQFSEER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20887; Mature: 20756

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFMKQSEFADLCGVSRQAVLNWKREGKLVMQGARVDVDASLARLSRVRRDGSPVQLDAG
CCCCCCCHHHHHHCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCC
KEAVVDIEIQPGESLDQAAERLAGEIDVDSTSFDEARRIKEVYLALLHRLDFEKKSGALV
CEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE
ELDTASTVLFEEFRAQRDAWLNWPAKVGPLIASELGIEADKITSVLVAHVHKQIAQLGEP
EECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
EVQFSEER
CCCCCCCC
>Mature Secondary Structure 
AFMKQSEFADLCGVSRQAVLNWKREGKLVMQGARVDVDASLARLSRVRRDGSPVQLDAG
CCCCCCHHHHHHCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCC
KEAVVDIEIQPGESLDQAAERLAGEIDVDSTSFDEARRIKEVYLALLHRLDFEKKSGALV
CEEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE
ELDTASTVLFEEFRAQRDAWLNWPAKVGPLIASELGIEADKITSVLVAHVHKQIAQLGEP
EECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
EVQFSEER
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA