| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352043
Identifier: 115352043
GI number: 115352043
Start: 2188674
End: 2189000
Strand: Direct
Name: 115352043
Synonym: Bamb_1992
Alternate gene names: NA
Gene position: 2188674-2189000 (Clockwise)
Preceding gene: 115352042
Following gene: 115352044
Centisome position: 61.54
GC content: 60.86
Gene sequence:
>327_bases ATGCCTAACCTGACGATCTTCATCCAGGCGGAAAAGATGCCGCCCGAAGCGAATCTGGCGGAACTCACCGAACGATGCAC TCGGCTTTGCACGGACGTCCTCCAGGCTGCGCTGGACAACGTGCATGTCATCTATGTCGCTGCTCGCCAGGGACGCGGGC ATCCTGCTTACGCGGAAATCAAGTTCCGCCTCGAACCGCTCAGAACGCCATCGGTCATGGACGCCTTCATGGCGCGACTG GATGAGGCCATAAAGCGCCATACGGGGCTAACGGCGCGCATCCGTTGCTTCGGCTATCCGGCCCCCGCCATCTATGCGCG GAACTGA
Upstream 100 bases:
>100_bases GTGGAAACCCTTCCGAAGGACGTGCACCTCTATGCCCCGATGACCGCGCAATTGACGAGTGGCAATGACGCAGTGCCCCA GACGCAGGGACAGAACCGAC
Downstream 100 bases:
>100_bases TTACGCGCAAGGAGCGCCGCAATGAACAAAATGAAATTTCCAGGTCAGCGGATCGGCGAGTTTTCGATCACGGCCATCAG TGACGGATACCTTTCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MPNLTIFIQAEKMPPEANLAELTERCTRLCTDVLQAALDNVHVIYVAARQGRGHPAYAEIKFRLEPLRTPSVMDAFMARL DEAIKRHTGLTARIRCFGYPAPAIYARN
Sequences:
>Translated_108_residues MPNLTIFIQAEKMPPEANLAELTERCTRLCTDVLQAALDNVHVIYVAARQGRGHPAYAEIKFRLEPLRTPSVMDAFMARL DEAIKRHTGLTARIRCFGYPAPAIYARN >Mature_107_residues PNLTIFIQAEKMPPEANLAELTERCTRLCTDVLQAALDNVHVIYVAARQGRGHPAYAEIKFRLEPLRTPSVMDAFMARLD EAIKRHTGLTARIRCFGYPAPAIYARN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12169; Mature: 12038
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLTIFIQAEKMPPEANLAELTERCTRLCTDVLQAALDNVHVIYVAARQGRGHPAYAEI CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEE KFRLEPLRTPSVMDAFMARLDEAIKRHTGLTARIRCFGYPAPAIYARN EEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECC >Mature Secondary Structure PNLTIFIQAEKMPPEANLAELTERCTRLCTDVLQAALDNVHVIYVAARQGRGHPAYAEI CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEE KFRLEPLRTPSVMDAFMARLDEAIKRHTGLTARIRCFGYPAPAIYARN EEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA