| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351898
Identifier: 115351898
GI number: 115351898
Start: 2031967
End: 2032446
Strand: Direct
Name: 115351898
Synonym: Bamb_1847
Alternate gene names: NA
Gene position: 2031967-2032446 (Clockwise)
Preceding gene: 115351897
Following gene: 115351899
Centisome position: 57.13
GC content: 63.54
Gene sequence:
>480_bases ATGCTTGAGCTGACAAGCGAACAGGTCGCCGGCCTTGCCGAGATCGACGCACGCGGATACGTCGAACGCACACGGCAGGA TCTCGTCAAAGCGGATCCGAAGCTGGCCGACGACGGCACGCTACCCACGCGCCTCTGGAACGCGTACATCGCTGCTCGAC GGCTTGGCATCCACTCCGATGAGAATGTCGCGGCGTTCCTCCGGATCGAGGCATACGCCCCGAGCTTCTACGAGAAGCCG GCGACGCGCGCATGGATAATGCGCCCCGGACGCTCTGCCGACGAACGCTTTCACGATTACCTACGCGTCATCAAATGGCG CATCGAACATCAAAATGTCCAGGGAGGGGCTGAGCATGGCGGGATTGGTGGTGCCGGCAATAGAAGCGGCGATAGTGGAA CTCGGCCCAGTCTTGGCGCGCGCTGGCGTCGCCTTATTGGGCGGGGCGGCAGTCGCGGGAACGGGGAGCCTGTCGGGTGA
Upstream 100 bases:
>100_bases GTGACATCGCTGATGGAATTCACGCAGCGCATGCAGTTCTTCGTCCCGACATTTAACTGGCTCGTTGAAGTGAATGGAAA ACTGAAGGGAGTGCACCCGC
Downstream 100 bases:
>100_bases CACCCAAAAGGACGAAAGCAAGGCAAAGCCGGACGTCCGGGCGATTCCGCGCACCGGTGAGAGCTGCAAGAAGTGCCCGC CTGAGACGGGGAGTATGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSDENVAAFLRIEAYAPSFYEKP ATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHGGIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG
Sequences:
>Translated_159_residues MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSDENVAAFLRIEAYAPSFYEKP ATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHGGIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG >Mature_159_residues MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSDENVAAFLRIEAYAPSFYEKP ATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHGGIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17538; Mature: 17538
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC ENVAAFLRIEAYAPSFYEKPATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHG CCEEEEEEEECCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLELTSEQVAGLAEIDARGYVERTRQDLVKADPKLADDGTLPTRLWNAYIAARRLGIHSD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC ENVAAFLRIEAYAPSFYEKPATRAWIMRPGRSADERFHDYLRVIKWRIEHQNVQGGAEHG CCEEEEEEEECCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC GIGGAGNRSGDSGTRPSLGARWRRLIGRGGSRGNGEPVG CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA