Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is bcp [H]

Identifier: 115351853

GI number: 115351853

Start: 1990914

End: 1991375

Strand: Direct

Name: bcp [H]

Synonym: Bamb_1802

Alternate gene names: 115351853

Gene position: 1990914-1991375 (Clockwise)

Preceding gene: 115351852

Following gene: 115351854

Centisome position: 55.98

GC content: 60.39

Gene sequence:

>462_bases
GTGTCCGTCGAAGTTGACCGTCAAGTTCCCGATTTCACCGCACCGGCTACGGGCGGCGACATTTCGCTGTCCGGCCTGAA
GGGCAAGAAGCTCGTCCTGTATTTCTATCCGAAGGACAACACGCCGGGCTGCACGACCGAAGGCCTGCAGTTCCGCGATC
TCTATCCGAAGTTCAAGAAGGCTGGCGCCGAAGTCATCGGCGTGTCGCGCGACAGCCTGCGCTCGCATGACAATTTCAAG
GCAAAGCTCGAGCTGCCGTTCCCGCTGATCTCCGATGCCGACGAAGCGCTGTGCGCGCTGTTCGACGTCATCAAGATGAA
GAAAATGTATGGCAAGGAAGTGCGCGGAATCGAGCGCTCGACGTTCCTGATCGACGCCGACGGCGTGCTCCGCCAGGCAT
GGCGCGGCATCAAGGTGCCCGGCCACGTGGACGACGTGCTAAGTGCTGTACAAGCGCTTTGA

Upstream 100 bases:

>100_bases
TGCGCGCCGGCACCGCCCGCCCCGCCCTCGCGGCGTGCCGCAGCGCCCCCGCCGAACCGCGCCGCCCGAGCGGCGCTTTC
CATAACAACAGGAGAAACAC

Downstream 100 bases:

>100_bases
GCCGCGCTATATTGGGCCGCAATGAATGCCAGTTCGCCCCATATTTCTCGTAGCTGCGCCGGTGCCCGTTGCGTTGCTTG
CCGGCACCTGACGCGCATCA

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSVEVDRQVPDFTAPATGGDISLSGLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEVIGVSRDSLRSHDNFK
AKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERSTFLIDADGVLRQAWRGIKVPGHVDDVLSAVQAL

Sequences:

>Translated_153_residues
MSVEVDRQVPDFTAPATGGDISLSGLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEVIGVSRDSLRSHDNFK
AKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERSTFLIDADGVLRQAWRGIKVPGHVDDVLSAVQAL
>Mature_152_residues
SVEVDRQVPDFTAPATGGDISLSGLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKKAGAEVIGVSRDSLRSHDNFKA
KLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERSTFLIDADGVLRQAWRGIKVPGHVDDVLSAVQAL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=164, Percent_Identity=34.7560975609756, Blast_Score=70, Evalue=9e-13,
Organism=Homo sapiens, GI4505591, Length=165, Percent_Identity=33.9393939393939, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI32455266, Length=165, Percent_Identity=33.9393939393939, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI32455264, Length=165, Percent_Identity=33.9393939393939, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1788825, Length=143, Percent_Identity=38.4615384615385, Blast_Score=104, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322180, Length=144, Percent_Identity=32.6388888888889, Blast_Score=63, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17738015, Length=164, Percent_Identity=35.9756097560976, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16862; Mature: 16730

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEVDRQVPDFTAPATGGDISLSGLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK
CCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
AGAEVIGVSRDSLRSHDNFKAKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERS
CCCEEEECCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TFLIDADGVLRQAWRGIKVPGHVDDVLSAVQAL
EEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SVEVDRQVPDFTAPATGGDISLSGLKGKKLVLYFYPKDNTPGCTTEGLQFRDLYPKFKK
CCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHH
AGAEVIGVSRDSLRSHDNFKAKLELPFPLISDADEALCALFDVIKMKKMYGKEVRGIERS
CCCEEEECCHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TFLIDADGVLRQAWRGIKVPGHVDDVLSAVQAL
EEEEECCHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]